G86010


Basic Information

Item Value
gene id G86010
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 17547162 ~ 17552766 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU107350
CGTGCCCGCGCAAGTGCGGAGCGGGGGCGCGCATGATTGAGCCGGAGGAGCACGGCGGCAGCGAGCAACAGAGACAGGGCTTCATCTCCCATTTTGTGCGGTTATTTGAAAACGACGAGCCGGTGTATCACTGCCTTCTGGAGCGTTACAGTGCTCCTGTCcggttattttatttatttgttttttaatatatatatttgaaacgGAAACAATTCACCGCTGCGTGGTGGGGGTGTGAAGATGGTGGTTCCGGAGAGTGGCACGGCAATTCAACCCCCAGATCACGGTGACGCTGGCATGGGGGAGGTCCCAGGCCCAGAGGCAGGGACGGAACTGCAGGAGGTACGTAAGCTGCAGGAACTGGTGAGGCGCCTGGAGATCCAGAACAAGCAGCTGCGCAACCGGGGGGGCAGAAGCCTTCTGGGTGGGGCAAACAGCAACCTAGCTGTAGCAGGCAACATCAATGAAAGGACTTTGGGGGAGTGCCCTCTCTCTGAGGGAGTGACCAATACTGCAGTGCCCCTCAGGCCGGGAGATGACAACATCAACCTCAGCAGCACGAACTGCGAGCCGCCTCCGCTGCAGGACAGCAACAGCAGTGGTGATGAGTCCTCGAACC
>TU107351
AACGAGCAGAAACCGTTATTGTTGAAATTCAAATACGTGGATCTGCGTGGTGGGGGTGTGAAGATGGTGGTTCCGGAGAGTGGCACGGCAATTCAACCCCCAGATCACGGTGACGCTGGCATGGGGGAGGTCCCAGGCCCAGAGGCAGGGACGGAACTGCAGGAGGTACGTAAGCTGCAGGAACTGGTGAGGCGCCTGGAGATCCAGAACAAGCAGCTGCGCAACCGGGGGGGCAGAAGCCTTCTGGGTGGGGCAAACAGCAACCTAGCTGTAGCAGGCAACATCAATGAAAGGACTTTGGGGGAGTGCCCTCTCTCTGAGGGAGTGACCAATACTGCAGTGCCCCTCAGGCCGGGAGATGACAACATCAACCTCAGCAGCACGAACTGCGAGCCGCCTCCGCTGCAGGACAGCAACAGCAGTGGTGATGAGTCCTCGAACC

Function

GO:

id name namespace
GO:0048729 tissue morphogenesis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU107350 True 619 TUCP 0.57 2 17547162 17552766
TU107351 False 442 TUCP 0.59 2 17547162 17552264

Neighbor

gene id symbol gene type direction distance location
AMCG00021445 NA coding downstream 7449 17518381 ~ 17539713 (-)
AMCG00021446 NA coding downstream 29495 17512562 ~ 17517667 (-)
AMCG00021437 NA coding downstream 71529 17456860 ~ 17475633 (-)
AMCG00021432 rps6ka6,rps6kal,LOC103359561,LOC102207076 coding downstream 266361 17249632 ~ 17280801 (-)
AMCG00021425 NA coding downstream 504655 17035957 ~ 17042507 (-)
AMCG00021447 NA coding upstream 35772 17588538 ~ 17589461 (-)
AMCG00021448 prps1b,prps1,LOC103391169,LOC108413289,LOC104923196,LOC107684920 coding upstream 63539 17616305 ~ 17632305 (-)
AMCG00021449 NA coding upstream 85634 17638400 ~ 17683108 (-)
AMCG00021452 NA coding upstream 499226 18051992 ~ 18058166 (-)
AMCG00021458 NA coding upstream 545126 18097892 ~ 18109169 (-)
G86013 NA non-coding downstream 14333 17532608 ~ 17532829 (-)
G86012 NA non-coding downstream 20023 17526753 ~ 17527139 (-)
G86000 NA non-coding downstream 33542 17513197 ~ 17513620 (-)
G85985 NA non-coding downstream 70258 17476704 ~ 17476904 (-)
G85977 NA non-coding downstream 87221 17459727 ~ 17459941 (-)
G86029 NA non-coding upstream 80989 17633755 ~ 17633986 (-)
G86154 NA non-coding upstream 770725 18323491 ~ 18324025 (-)
G86203 NA non-coding upstream 996678 18549444 ~ 18549757 (-)
G86222 NA non-coding upstream 1039874 18592640 ~ 18631467 (-)
G86225 NA non-coding upstream 1069797 18622563 ~ 18623590 (-)
G85953 NA other downstream 123744 17419604 ~ 17423418 (-)
AMCG00021435 hdx,LOC107572093 other downstream 243692 17286249 ~ 17303470 (-)
AMCG00021412 NA other downstream 897222 16647139 ~ 16649940 (-)
AMCG00021387 NA other downstream 1304507 16234317 ~ 16242655 (-)
AMCG00021304 NA other downstream 3475837 14057918 ~ 14071325 (-)
AMCG00021444 NA other upstream 28476 17581242 ~ 17585441 (-)
G86049 NA other upstream 373333 17926099 ~ 17926708 (-)
AMCG00021460 rhog,LOC101076287,LOC107396352,LOC104923191,LOC105923887 other upstream 688471 18241237 ~ 18248894 (-)
G86241 NA other upstream 1268767 18821533 ~ 18909908 (-)
AMCG00021483 NA other upstream 1706668 19259434 ~ 19274440 (-)

Expression


Co-expression Network