G86049


Basic Information

Item Value
gene id G86049
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 17926099 ~ 17926708 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU107397
cactgacaaagaaatgatcagtctataattttaatggtaggtgtattttaacagtgagagacagaataacaacaaacaaatccagaaaaacgcatttcaaaaaagttataaattgatttgcatgttaatgagggaaataagtatttgatcccctatcagtcagcaagatttctggctcccaggtgtcttttatacaggtaacgagctgagattaggagcactctcttaaagggagtgacacctgtccacagaagcaatcaatcaatcagattccaaactctccaccatggccaagaccaaagagctgtccaaggatatcagggacaagattgtagacctacacaaggctggaatggatgacaagaccatcgccaagcagcttggtgagaaggtgacaacagttggtgcgattattcgcaaatggaataaacacaaaataactgtcagtctccctcggtctggggctccatgcaaggtctcacctcgtggagtttcaatgatcatgagaacagTAGGAATCAGCACAGACCTAcatgggaggatcttgttaatgatctcaaggcagctgggaccatagt

Function

NR:

description
uncharacterized protein LOC101886504

GO:

id name namespace
GO:0009123 nucleoside monophosphate metabolic process biological_process
GO:0009124 nucleoside monophosphate biosynthetic process biological_process
GO:0009126 purine nucleoside monophosphate metabolic process biological_process
GO:0009127 purine nucleoside monophosphate biosynthetic process biological_process
GO:0009156 ribonucleoside monophosphate biosynthetic process biological_process
GO:0009161 ribonucleoside monophosphate metabolic process biological_process
GO:0009167 purine ribonucleoside monophosphate metabolic process biological_process
GO:0009168 purine ribonucleoside monophosphate biosynthetic process biological_process

KEGG:

id description
ko00680 Methane metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU107397 True 578 TUCP 0.42 2 17926099 17926708

Neighbor

gene id symbol gene type direction distance location
AMCG00021449 NA coding downstream 242991 17638400 ~ 17683108 (-)
AMCG00021448 prps1b,prps1,LOC103391169,LOC108413289,LOC104923196,LOC107684920 coding downstream 293794 17616305 ~ 17632305 (-)
AMCG00021447 NA coding downstream 336638 17588538 ~ 17589461 (-)
AMCG00021445 NA coding downstream 386386 17518381 ~ 17539713 (-)
AMCG00021446 NA coding downstream 408432 17512562 ~ 17517667 (-)
AMCG00021452 NA coding upstream 125284 18051992 ~ 18058166 (-)
AMCG00021458 NA coding upstream 171184 18097892 ~ 18109169 (-)
AMCG00021457 NA coding upstream 182910 18109618 ~ 18148550 (-)
AMCG00021456 NA coding upstream 226297 18153005 ~ 18165667 (-)
AMCG00021459 ogt.1,ogt coding upstream 269429 18196137 ~ 18226215 (-)
G86029 NA non-coding downstream 292113 17633755 ~ 17633986 (-)
G86013 NA non-coding downstream 393270 17532608 ~ 17532829 (-)
G86012 NA non-coding downstream 398960 17526753 ~ 17527139 (-)
G86000 NA non-coding downstream 412479 17513197 ~ 17513620 (-)
G85985 NA non-coding downstream 449195 17476704 ~ 17476904 (-)
G86154 NA non-coding upstream 396783 18323491 ~ 18324025 (-)
G86203 NA non-coding upstream 622736 18549444 ~ 18549757 (-)
G86222 NA non-coding upstream 665932 18592640 ~ 18631467 (-)
G86225 NA non-coding upstream 695855 18622563 ~ 18623590 (-)
G86240 NA non-coding upstream 732590 18659298 ~ 18663129 (-)
AMCG00021444 NA other downstream 340658 17581242 ~ 17585441 (-)
G86010 NA other downstream 373333 17547162 ~ 17552766 (-)
G85953 NA other downstream 502681 17419604 ~ 17423418 (-)
AMCG00021435 hdx,LOC107572093 other downstream 622629 17286249 ~ 17303470 (-)
AMCG00021412 NA other downstream 1276159 16647139 ~ 16649940 (-)
AMCG00021460 rhog,LOC101076287,LOC107396352,LOC104923191,LOC105923887 other upstream 314529 18241237 ~ 18248894 (-)
G86241 NA other upstream 894825 18821533 ~ 18909908 (-)
AMCG00021483 NA other upstream 1332726 19259434 ~ 19274440 (-)
G86327 NA other upstream 1348646 19275354 ~ 19278023 (-)
AMCG00021495 acbd7,LOC106595206 other upstream 1519378 19446086 ~ 19468782 (-)

Expression


Co-expression Network