G86121


Basic Information

Item Value
gene id G86121
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 18248490 ~ 18249686 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU107506
CTGGATTCCTTGTAGAAGCTCTAACATCAGCCCAGCCACCCCCCTACCAGCAGTCCCTCATAACACCAACTCTCTCCCAGCAGACACAGCTGCTGCACACAGCCGCTGCCTCCGTTCCCAGGAGGACAAGCAGGCAgatggatggacagacagacggacagacagctGTTGAGACAGTGTTGGCAATACACTGTGTTGGACAGACTGCGCTGCTGGGTTCCTGCAGGGAGGTGAGAGTGCACTGCACCCCCTTGCTTGCTCAGACCTAGCTCATACAGGAGCCCCACAGGCCAGAAGGTGAGAGTGCTCCAGATTTGATGGGTCAACTGGCCACCCAGGGTCTCCATCTGCATCACTGCCTCTGTGCACTGGGGACTGACGTTTCTGAGGGCAGACACTGTCTGGGCTTccatagataaataaattaaaggaaaacaaaatatatatttatataaacacccaaaaacaacacattttcctGTGCACACCTGAGGCTGCAGTCTCAGTGTTGGGTGGCAACACCCGCTCTCATCTCCACTGGGGTTGTGTGGGGGGACGGGTGGTTTTGGTGGGCTGGGTCACAGGGCTCCTGGTTCCGGCGCTGCTGGGCTTGGCTGCAGTGACGCCATGCTGAGCCCGGACCCTGGGGCCAGCAGGGGGACTCTGCAGGGAGCGGGAGGGGACCTCTGTGCTGGGGGGGGCAGCAGCATGCCGTCTAGAGCCTCTGTGTGAGGGGGCATGGCCCAGGGGCTCTGTGGCTATGGTGCCCAGCCTATCCTTGTCTGGTTTGGGTCTTTCTACATGCCGTCGCATTGCTGCGCTGGCTCGGCCTGCCACTTCCGTCCTCTCCCACAGGATGCCAGAGCGCGAGAGGGTGGGGATAGTGGTGCGCTGGGAGAGGGTGCGAGACGAGGGCGGCTGGGAACCTTGCAGGGCTTCTGTGACCTCAGCAGTGGGAATGGGCTTGTCTACCCTGGCTGTGCCACCCCTGGCCCGGTTCCCCAGTCCGCCCCTCTCCCTCAGGCTTCTCTTCAGTGCAATCTCCCTGGGCCGCTCCTTTCTGTGCCTCATGCCCTCTGCTGGCTCTTTGATGGAGGTCCTGCAGCCTCTCCCCCGCTCTAGgccctctgcctccctctccctctgccacTTGGAGCAGCGGGCAGGGGCGGGGGGAGTGGGGCGGGGCGCAGTCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU107506 True 1197 TUCP 0.61 1 18248490 18249686

Neighbor

gene id symbol gene type direction distance location
AMCG00021455 NA coding upstream 60328 18177180 ~ 18188162 (+)
AMCG00021454 cetn2,LOC108436166,LOC107710936,LOC107663123 coding upstream 77946 18167847 ~ 18170544 (+)
AMCG00021453 NA coding upstream 136269 18109078 ~ 18112221 (+)
AMCG00021450 NA coding upstream 180716 18061621 ~ 18067774 (+)
AMCG00021451 NA coding upstream 198086 18033191 ~ 18050404 (+)
AMCG00021463 taf1 coding downstream 88370 18338056 ~ 18387523 (+)
AMCG00021465 NA coding downstream 239217 18488903 ~ 18540148 (+)
AMCG00021466 rab9b,LOC103026314,LOC108436189 coding downstream 306106 18555792 ~ 18556400 (+)
AMCG00021473 tmem55a,LOC107724355,LOC107702130 coding downstream 781605 19031291 ~ 19045850 (+)
AMCG00021475 tmem64,LOC107743834,LOC107696193 coding downstream 858091 19107777 ~ 19119568 (+)
G86118 NA non-coding upstream 18824 18229465 ~ 18229666 (+)
G86117 NA non-coding upstream 22248 18222835 ~ 18226242 (+)
G86034 NA non-coding upstream 599959 17648274 ~ 17648531 (+)
G86020 NA non-coding upstream 632037 17614614 ~ 17616453 (+)
G86018 NA non-coding upstream 663018 17581307 ~ 17585472 (+)
G86202 NA non-coding downstream 299742 18549428 ~ 18549759 (+)
G86217 NA non-coding downstream 365484 18615170 ~ 18618556 (+)
G86227 LOC107748936,LOC107689138,LOC107733406,LOC107663109 non-coding downstream 413507 18663193 ~ 18664533 (+)
G86229 LOC106604239,LOC107733406,LOC107748936,LOC104952214 non-coding downstream 429427 18679113 ~ 18679876 (+)
G86284 NA non-coding downstream 903329 19153015 ~ 19153282 (+)
AMCG00021441 NA other upstream 775094 17470325 ~ 17473396 (+)
G85869 NA other upstream 1244359 16997877 ~ 17004131 (+)
G85787 NA other upstream 1534452 16656644 ~ 16714038 (+)
G85764 LOC103366846,LOC106930986 other upstream 1655517 16590181 ~ 16592973 (+)
AMCG00021373 ubl3b,LOC107658069,LOC107707244,LOC108432919,LOC101472018,LOC107092570,LOC105029324,LOC100692344,LOC103390851 other upstream 2174869 16063499 ~ 16073621 (+)
AMCG00021472 NA other downstream 797363 19047049 ~ 19055103 (+)
AMCG00021485 NA other downstream 1030079 19279765 ~ 19294779 (+)
G86407 NA other downstream 1250114 19499800 ~ 19501242 (+)
G86601 NA other downstream 2092924 20342610 ~ 20401249 (+)
AMCG00021517 gatad1 other downstream 2118467 20368153 ~ 20371536 (+)

Expression


Co-expression Network