G86284


Basic Information

Item Value
gene id G86284
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 19153015 ~ 19153282 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU107705
agctcaaattgctgaaaaagtgaatgctggttctgatagaaaggtgtcagaacacacagtgcatcgcagtttgttgcatatggggctgcgtagccgcagaccagtcagggtgcccatgctgacccctgtccactgccgaaagcgcctacaatgggcacgtgagcatcagaactggaccacggagcaatggatgaaggtgacctggtctgatgaatcacgagttcaaggtgttgacttggcctccaaattccccagatctcaatccaat

Function

GO:

id name namespace
GO:0005003 ephrin receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU107705 True 268 lncRNA 0.51 1 19153015 19153282

Neighbor

gene id symbol gene type direction distance location
AMCG00021475 tmem64,LOC107743834,LOC107696193 coding upstream 33447 19107777 ~ 19119568 (+)
AMCG00021473 tmem55a,LOC107724355,LOC107702130 coding upstream 107165 19031291 ~ 19045850 (+)
AMCG00021466 rab9b,LOC103026314,LOC108436189 coding upstream 596615 18555792 ~ 18556400 (+)
AMCG00021465 NA coding upstream 612867 18488903 ~ 18540148 (+)
AMCG00021463 taf1 coding upstream 765492 18338056 ~ 18387523 (+)
AMCG00021480 pnp4b,LOC107755717,LOC107700705,LOC107704990,LOC107705461,LOC107588484,LOC108437351,LOC108272756 coding downstream 11396 19164678 ~ 19180521 (+)
AMCG00021478 calb1,LOC107704882,LOC107700706,LOC107588486 coding downstream 49596 19202878 ~ 19220274 (+)
AMCG00021479 NA coding downstream 78846 19232128 ~ 19247678 (+)
AMCG00021484 NA coding downstream 146254 19299536 ~ 19307124 (+)
AMCG00021488 NA coding downstream 188538 19341820 ~ 19342824 (+)
G86229 LOC106604239,LOC107733406,LOC107748936,LOC104952214 non-coding upstream 473139 18679113 ~ 18679876 (+)
G86227 LOC107748936,LOC107689138,LOC107733406,LOC107663109 non-coding upstream 488482 18663193 ~ 18664533 (+)
G86217 NA non-coding upstream 534459 18615170 ~ 18618556 (+)
G86202 NA non-coding upstream 603256 18549428 ~ 18549759 (+)
G86118 NA non-coding upstream 923349 18229465 ~ 18229666 (+)
G86309 NA non-coding downstream 71171 19224453 ~ 19226768 (+)
G86323 NA non-coding downstream 105176 19258458 ~ 19258855 (+)
G86367 NA non-coding downstream 238815 19392097 ~ 19394874 (+)
G86387 NA non-coding downstream 295447 19448729 ~ 19449107 (+)
G86419 NA non-coding downstream 432707 19585989 ~ 19587369 (+)
AMCG00021472 NA other upstream 97912 19047049 ~ 19055103 (+)
G86121 NA other upstream 903329 18248490 ~ 18249686 (+)
AMCG00021441 NA other upstream 1679619 17470325 ~ 17473396 (+)
G85869 NA other upstream 2148884 16997877 ~ 17004131 (+)
G85787 NA other upstream 2438977 16656644 ~ 16714038 (+)
AMCG00021485 NA other downstream 126483 19279765 ~ 19294779 (+)
G86407 NA other downstream 346518 19499800 ~ 19501242 (+)
G86601 NA other downstream 1189328 20342610 ~ 20401249 (+)
AMCG00021517 gatad1 other downstream 1214871 20368153 ~ 20371536 (+)
G86616 NA other downstream 1225141 20378423 ~ 20380424 (+)

Expression


Co-expression Network