G86323


Basic Information

Item Value
gene id G86323
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 19258458 ~ 19258855 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU107751
ccagcattcactttttcagcaatttgagctacagtagtaGTGgatgcatcagtgagccttggctgcccatgaacCTGTTGcgggttcaccgcttttccttccttggaccacttttgataggtactgaccactgcagaccaggaacaccccacaagagctgcagttttggagatgctctgacccagtcgtctagccatcacaatttggcccttgtcaaagtcgctcagatccttacgcttgcccatttttcctgcttctaacacatcaactttgaggacaaaatgttcacttgctgcctaatatatcccacccactgacaggtgccatgataacgagattatcagtgttattcacttcacctgtcagtggtcataatgttgtggctgatcggtgtatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU107751 True 398 lncRNA 0.47 1 19258458 19258855

Neighbor

gene id symbol gene type direction distance location
AMCG00021479 NA coding upstream 10780 19232128 ~ 19247678 (+)
AMCG00021478 calb1,LOC107704882,LOC107700706,LOC107588486 coding upstream 38184 19202878 ~ 19220274 (+)
AMCG00021480 pnp4b,LOC107755717,LOC107700705,LOC107704990,LOC107705461,LOC107588484,LOC108437351,LOC108272756 coding upstream 77937 19164678 ~ 19180521 (+)
AMCG00021475 tmem64,LOC107743834,LOC107696193 coding upstream 138890 19107777 ~ 19119568 (+)
AMCG00021473 tmem55a,LOC107724355,LOC107702130 coding upstream 212608 19031291 ~ 19045850 (+)
AMCG00021484 NA coding downstream 40681 19299536 ~ 19307124 (+)
AMCG00021488 NA coding downstream 82965 19341820 ~ 19342824 (+)
AMCG00021491 NA coding downstream 125174 19384029 ~ 19391754 (+)
AMCG00021493 NA coding downstream 163869 19422724 ~ 19446623 (+)
AMCG00021492 NA coding downstream 201609 19460464 ~ 19465577 (+)
G86309 NA non-coding upstream 31690 19224453 ~ 19226768 (+)
G86284 NA non-coding upstream 105176 19153015 ~ 19153282 (+)
G86229 LOC106604239,LOC107733406,LOC107748936,LOC104952214 non-coding upstream 578582 18679113 ~ 18679876 (+)
G86227 LOC107748936,LOC107689138,LOC107733406,LOC107663109 non-coding upstream 593925 18663193 ~ 18664533 (+)
G86217 NA non-coding upstream 639902 18615170 ~ 18618556 (+)
G86367 NA non-coding downstream 133242 19392097 ~ 19394874 (+)
G86387 NA non-coding downstream 189874 19448729 ~ 19449107 (+)
G86419 NA non-coding downstream 327134 19585989 ~ 19587369 (+)
G86454 NA non-coding downstream 570961 19829816 ~ 19837813 (+)
G86455 NA non-coding downstream 593514 19852369 ~ 19894619 (+)
AMCG00021472 NA other upstream 203355 19047049 ~ 19055103 (+)
G86121 NA other upstream 1008772 18248490 ~ 18249686 (+)
AMCG00021441 NA other upstream 1785062 17470325 ~ 17473396 (+)
G85869 NA other upstream 2254327 16997877 ~ 17004131 (+)
G85787 NA other upstream 2544420 16656644 ~ 16714038 (+)
AMCG00021485 NA other downstream 20910 19279765 ~ 19294779 (+)
G86407 NA other downstream 240945 19499800 ~ 19501242 (+)
G86601 NA other downstream 1083755 20342610 ~ 20401249 (+)
AMCG00021517 gatad1 other downstream 1109298 20368153 ~ 20371536 (+)
G86616 NA other downstream 1119568 20378423 ~ 20380424 (+)

Expression


Co-expression Network