G86386


Basic Information

Item Value
gene id G86386
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 19446417 ~ 19448494 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU107823
TGCAGATTCAAGCTGGAGTggtttatttagaaatatatttcattcaggAAACACAATcacttgtttttaatattgtcaatacaaaatcaaagatTCAATCAATAAGTATTGTGGTTACAACATCACCAAGTTACTCAAACATGTAGTGCATCGAGTTTACAGTACACCTTtagatataaaaacatacacacagtttGTGATTATGAAACtcatagaaaatataaataatttaggCCAATAGACATGTCTTTTATTGAAGTGTGGGACCAAGGCTGGCTGAAGGCAGACGGAGCTGATGCTTTACTAGTAAACGGTTAAGGGATCCAATAACGGGGATTTTGATTGTTCTTAGAAAACCATGTAAAATGCTTACATAATACCAGTAAGGCTCTAACTGCGAAGAGGCCGCTGAATGATTACACTGGTGACCGCAAGGGGTCTTCctcttttgattttagtaattccatctttcattagttttagttaattaGTCAACATCTAAAACTCCTGTCATTTGAGTCTAGTTTTAgtccatgtattttattaacttcattatcaccattatgcattatgtctgatgccagatgtttacatcaattacTGGACAGATTCAAAACAAACCTattgattgaattatttttaaatttatttggaatcaagtcacaaacagctattgtaaACTTCACGGtcacaaattagtttttttttttttaagtttgaagtctctctttacattttttgtaataagaatAGAGTACAAGAgcagtatggaagcatatagtggatgttattaaaatgcaaatgtaatcccaaaattgcattttcattttccatgtatgcatgtgttatttagataaaaatacaaatacaatcatgctgtttgtagttttatattCCAGTACGCACATTTgctgacaatattaacatttcaaatggctaTTGGTTTAACATTTCATCTTCAAAGACTTCCCCCGCTGATACACAAAAGATTGCATGTTTAcagtgatattaaaagcataagcagCATATTGTTAAGCTCTACTGTAGCCAAGCGTGAATTGCGCTTCATGCTGTAAGTGCATACCATGGCTTAGTTTAAGCCCAATACAGTAAACCAGTGATACACACGCTTGTGTACAATTGGGTCACAAtctgttgcgcagatttccacagttctgcgcagatctgcagaatcccaccgatcccattggtggagcattgcagatctgtgcagaactgagATTAGCAGCGCTACACCAACGCGATGACCGAGTCTAGGTATGCACGATTATGATTAGACCATGAAACAGCTCCCTGACCGGCCGCCTCGCAAAATACTGTACGTCCATTagtcttgaattgaatttttttttagtcacattttagtcaactaaaattaggagatatttatttttatttttagttttttgtcccCCACAGTATTTCGTCTCGTTATTGTCATAGTTAtcgtcactgaaaataggtcGTTGATGAATATCTTTCCCCAGGCCTGGGGAAAGGGCAGCTCAGTGACATCACAGCCCCTGAGCGTGAGCAAAGATCTCAGCCGATTCTCACAGGAGCCACAACAACACGGGACTCCCTGAGGCAGACCTGCTCTCCCAGAGTTTCCAACTCGGAGGAATCCGACCTTTTTCATATCTTCAAAAATCACGCTTCAGTGAGAGTCTCCTCCTGCGATTCCTCCCTCTCATTTCAACcagtgcatttctgtttttgtttcagttggtATTGTTTTCCACTATAAATGAGTTAAATGAGGCCTGTCCCGTAAACTGTCTCTGTGGTGAAGTTGGCACACAGGGCGGCAACCGCCTGTCCTCTCACTTCTCCGTGTGGTTTCCCATCTGTGCCGTGACGAGCGAGTGGTACACGCCCTGCTTGGCCAGGAGCTGCTGGTGGGTCCCCTGCTCGGCCAGCTTCCCGTCCTGGAACACGGCTATCCGGTCGGCGTTCTGGATGGTGGAGAGCCGGTGGGCCACGATGATACAGGTCCGGCCTTCCCTGGCTTTGTCCAGCGCCTCCTGCAC

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04976 Bile secretion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU107823 True 2051 lncRNA 0.41 2 19446417 19448494

Neighbor

gene id symbol gene type direction distance location
AMCG00021494 NA coding downstream 36921 19393011 ~ 19409496 (-)
AMCG00021486 NA coding downstream 62461 19376411 ~ 19383956 (-)
AMCG00021490 NA coding downstream 92026 19344966 ~ 19354391 (-)
AMCG00021487 adam22,LOC107719137,LOC107714333 coding downstream 106899 19307357 ~ 19339518 (-)
AMCG00021489 NA coding downstream 149518 19296483 ~ 19296899 (-)
AMCG00021499 nmt2,LOC107738873,LOC107549229 coding upstream 24441 19472935 ~ 19482233 (-)
AMCG00021497 NA coding upstream 38134 19486628 ~ 19488734 (-)
AMCG00021500 NA coding upstream 51742 19500236 ~ 19503565 (-)
AMCG00021498 NA coding upstream 75034 19523528 ~ 19584960 (-)
AMCG00021502 LOC103376377 coding upstream 138725 19587219 ~ 19610896 (-)
G86324 NA non-coding downstream 187562 19258557 ~ 19258855 (-)
G86285 NA non-coding downstream 293132 19153005 ~ 19153285 (-)
G86253 NA non-coding downstream 439985 19005616 ~ 19006432 (-)
G86249 NA non-coding downstream 527886 18918254 ~ 18918531 (-)
G86244 NA non-coding downstream 635270 18750672 ~ 18811147 (-)
G86474 NA non-coding upstream 451964 19900458 ~ 19900836 (-)
G86472 NA non-coding upstream 455502 19903996 ~ 19912403 (-)
G86477 NA non-coding upstream 464043 19912537 ~ 19918803 (-)
G86530 NA non-coding upstream 703726 20152220 ~ 20152767 (-)
G86598 NA non-coding upstream 877199 20325693 ~ 20339742 (-)
G86327 NA other downstream 168394 19275354 ~ 19278023 (-)
AMCG00021483 NA other downstream 171977 19259434 ~ 19274440 (-)
G86241 NA other downstream 536509 18821533 ~ 18909908 (-)
AMCG00021460 rhog,LOC101076287,LOC107396352,LOC104923191,LOC105923887 other downstream 1197523 18241237 ~ 18248894 (-)
G86049 NA other downstream 1519709 17926099 ~ 17926708 (-)
AMCG00021514 NA other upstream 832658 20281152 ~ 20284979 (-)
G86600 NA other upstream 880928 20329422 ~ 20335304 (-)
G86640 NA other upstream 909807 20358301 ~ 20360255 (-)
G86649 NA other upstream 947118 20395612 ~ 20397783 (-)
AMCG00021534 bet1,LOC107669829,LOC107722155 other upstream 1273390 20721884 ~ 20724880 (-)

Expression


Co-expression Network