G86536


Basic Information

Item Value
gene id G86536
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 20205192 ~ 20205538 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU108008
GTGGGGTTTTTCTCCAATCCCTTTTAATACAGTTTCCCCCTGAAAAGACCACAGTTCTATAGACTGGAGCAGATTTCCACCAAAAGCAACGCTGACAAGCTCCAACTGCTCAGTGTATGAAGGTCATAATCACATCACTGGGGAAGTCACTGGAACTCAGTGATTGACAGGTTCTGCACAAagtaaaaccaaaatgaaaaaaaaaaaaaaacgaaaaaaaaaccACTGAGACTTTTCAGATCAaatgagggagaaaaaaacattcctgCTCAGTTGTCTGCAGTGTTGGATGAGCTCCTCCAGATGTTGACTTTTTCACTCAACCAAGGTGGTTTTGCACAGCACCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108008 True 347 lncRNA 0.42 1 20205192 20205538

Neighbor

gene id symbol gene type direction distance location
AMCG00021512 fzd1,LOC106605515,LOC105910048,LOC107565291 coding upstream 91097 20112413 ~ 20114095 (+)
AMCG00021511 cdk14 coding upstream 147407 20022522 ~ 20057785 (+)
AMCG00021507 NA coding upstream 222763 19975603 ~ 19982429 (+)
AMCG00021510 NA coding upstream 230088 19971973 ~ 19975104 (+)
AMCG00021506 NA coding upstream 259537 19937739 ~ 19945655 (+)
AMCG00021513 NA coding downstream 8611 20214149 ~ 20274383 (+)
AMCG00021518 NA coding downstream 108642 20314180 ~ 20339738 (+)
AMCG00021522 NA coding downstream 184219 20389757 ~ 20393261 (+)
AMCG00021526 NA coding downstream 275673 20481211 ~ 20493174 (+)
AMCG00021527 vps50 coding downstream 300487 20506025 ~ 20524326 (+)
G86529 NA non-coding upstream 52426 20152245 ~ 20152766 (+)
G86455 NA non-coding upstream 310573 19852369 ~ 19894619 (+)
G86454 NA non-coding upstream 367379 19829816 ~ 19837813 (+)
G86419 NA non-coding upstream 617823 19585989 ~ 19587369 (+)
G86387 NA non-coding upstream 756085 19448729 ~ 19449107 (+)
G86573 NA non-coding downstream 92924 20298462 ~ 20298782 (+)
G86625 NA non-coding downstream 202866 20408404 ~ 20409658 (+)
G86633 NA non-coding downstream 256717 20462255 ~ 20462991 (+)
G86665 NA non-coding downstream 295248 20500786 ~ 20501303 (+)
G86668 NA non-coding downstream 302970 20508508 ~ 20547410 (+)
G86407 NA other upstream 703950 19499800 ~ 19501242 (+)
AMCG00021485 NA other upstream 910413 19279765 ~ 19294779 (+)
AMCG00021472 NA other upstream 1150089 19047049 ~ 19055103 (+)
G86121 NA other upstream 1955506 18248490 ~ 18249686 (+)
AMCG00021441 NA other upstream 2731796 17470325 ~ 17473396 (+)
G86601 NA other downstream 137072 20342610 ~ 20401249 (+)
AMCG00021517 gatad1 other downstream 162615 20368153 ~ 20371536 (+)
G86616 NA other downstream 172885 20378423 ~ 20380424 (+)
G86688 NA other downstream 461932 20667470 ~ 20667927 (+)
AMCG00021539 pdk4,LOC107722149 other downstream 703279 20908817 ~ 20912002 (+)

Expression


Co-expression Network