G86598


Basic Information

Item Value
gene id G86598
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 20325693 ~ 20339742 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU108095
GCAAGTTTTACACAATTTTATTTAGAGTAAAACTTAACTGATACTTTCATTAATTGGCCAGAcatcaaacattacatatttccaTATAAACTGGGAATGTATCAAGTATAGACTATGAAAGTGCAAATAGCATTTCAAGGTTAAGTtgctttttacaatataaaatttCACTGGGTTACAAAATAAGTTTGCCAATTCTTAAAGTCATTTACCATGacagattttaaaattcagtaccaagaaaatacaaatcgaATGTAGTATGACCTTTTTTCATGCACAGCATACTGTAACACAGAAGAGGACAATCGTTAAACTCCACAACTCGATCTACAAAACAAGAGTCCCACAAAGTTCACTTACTCCATATACACCACTCTGACACAGCGTTacttctgcaagacaaatttaaacgTGATACATATCAGCTTGGTAACTGTTCTATTGATCAGATTACAATTAGTTCAGTACAGTCACACACCAATTTGGGAGAGACcaattgaaaaagtaaaattcTCAGAAGACCTTCCAACGATTTAGGTCTCTTCGTGTTAttgttgtaaacaaaacaaataaaaaatgtccaattcattttcagtgttcaatattgtttttgaagCTACATTTTCCATGAAGTTGTGAGGGACATTCAATTTCAAAGAAATCATAGCAagtcatttagtttttttaaaggtgtcCTGCTTCCTAGTGTTGTTAACTGTGTGCGGTAATCTCTGCACTTCCCCCGAGCTCACCCTGACCCCTCCTCTGCTACGTCTAAAGATCTGTACTTCTCTGCTACTTCTTGCAACATCAGCCCTCGGTCAGACTGTGCATGCCTcaaccaaaacacaaattaaacagaaaaattaacaaaaacaatgttatatattttcttaaatgaaatGTTACAGAGTTAACCAACAATGACCACACAATGCATTTGGCTATATTCATGTAAAAATTGTATGCTTTATTCAATGCATAAAGACAAATCTTAAACTGCCTGAACAGGCTGAAGAGACCTagaatgaatgtgtgtgagtgtgtgtatatatatatatatacacacacacacacacacacacacact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108095 True 1093 lncRNA 0.34 2 20325693 20339742

Neighbor

gene id symbol gene type direction distance location
AMCG00021519 krit1 coding downstream 28043 20287321 ~ 20297650 (-)
AMCG00021515 LOC106570209 coding downstream 46318 20275058 ~ 20279375 (-)
AMCG00021516 NA coding downstream 118217 20206322 ~ 20207476 (-)
AMCG00021509 NA coding downstream 363596 19951017 ~ 19962097 (-)
AMCG00021508 NA coding downstream 416020 19905943 ~ 19909673 (-)
AMCG00021521 NA coding upstream 32058 20371800 ~ 20376570 (-)
AMCG00021520 NA coding upstream 38681 20378423 ~ 20389444 (-)
AMCG00021524 fam133b coding upstream 63041 20402783 ~ 20412472 (-)
AMCG00021523 cdk6,LOC106588946,LOC107567973,LOC107667775,LOC107558583 coding upstream 74788 20414530 ~ 20435051 (-)
AMCG00021525 cdk6,LOC107667775,LOC107558583,LOC107722162,LOC107567973 coding upstream 104801 20444543 ~ 20460278 (-)
G86530 NA non-coding downstream 172926 20152220 ~ 20152767 (-)
G86477 NA non-coding downstream 406890 19912537 ~ 19918803 (-)
G86472 NA non-coding downstream 413290 19903996 ~ 19912403 (-)
G86474 NA non-coding downstream 424857 19900458 ~ 19900836 (-)
G86386 NA non-coding downstream 877199 19446417 ~ 19448494 (-)
G86639 NA non-coding upstream 15328 20355070 ~ 20356479 (-)
G86648 NA non-coding upstream 53302 20393044 ~ 20394206 (-)
G86689 NA non-coding upstream 272921 20612663 ~ 20614108 (-)
G86736 NA non-coding upstream 481890 20821632 ~ 20822603 (-)
G86738 NA non-coding upstream 483258 20823000 ~ 20823964 (-)
AMCG00021514 NA other downstream 40714 20281152 ~ 20284979 (-)
AMCG00021495 acbd7,LOC106595206 other downstream 856911 19446086 ~ 19468782 (-)
G86327 NA other downstream 1047670 19275354 ~ 19278023 (-)
AMCG00021483 NA other downstream 1051253 19259434 ~ 19274440 (-)
G86241 NA other downstream 1415785 18821533 ~ 18909908 (-)
G86640 NA other upstream 18559 20358301 ~ 20360255 (-)
G86649 NA other upstream 55870 20395612 ~ 20397783 (-)
AMCG00021534 bet1,LOC107669829,LOC107722155 other upstream 382142 20721884 ~ 20724880 (-)
G86808 NA other upstream 724116 21063858 ~ 21083570 (-)
AMCG00021569 NA other upstream 1326660 21666402 ~ 21671315 (-)

Expression


Co-expression Network