G86600


Basic Information

Item Value
gene id G86600
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 20329422 ~ 20335304 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU108097
GGCCCTTAAACACCCAACTTGCCATAACAGAAGAAGTGCCTGTACTGCCTAATCAATAACTAAGGTTCAGGAGTGGCCCTGAGTATTATTCCACAacctggataggggctctctcAGACCACAGTCCGCCGCAGGAGTGTGAGTGGCGGTACCGGTGTGTGAGGCAACGTGTGAGAGTCTGGGTcagcgtgtgcgtgtgtccgTGTGCAGCGCAGGTTCTGGGCAGCGTACCTAAAGCACTCTCGCTGGGGTCGTCGGGGTCAGGGGTGTTACTGCGCACGCTGTGCATGTCTCCTCTGCGCCGCTGCCGGTGTCTCCTCCTGTACTGGAACTCGGCATACTCCTGCAGGAACCACGAAGCACCGGCAACCTTAGCACTGTTCCTCCTCACCACGGCCCCTCCTGTCTCCCACATATCAGCCCCATAGCGCCCACTACACAACCAGTTAGACGGCTCTGTGACAGCTTCTGGCAGCCGAGTCGACCTAGGCTCCAGCTCGCTCACACACTGAGGTACACACGCTTTTGTGCCCGCACACGCCCTCACGTACAGCTTTGATTGGTCTGTCCGCTGCCATGAAGCTGCACAgaggcgcacacacacagcgcacAACACagtcacaacacacacaacattccAGGAGATATTATAGGgatgtacaaaaaacaaaaaacaagcaaacaaacaaacaaaaaacaaaaacacctaaATACCACATCctctttttgtttggtttttcctTTAGGCCTCTGATTGCTGGAGGTCAGATGTGAAAATCTGATTTCATGTGCGATGCACACATTGACAAGAGCACATCTGACTCTCGGGTTTTCCCTGTTTCAGGGCCCAGGCAGCAGATCCGATCGCACGGAGGAAGATGGTATGCGAGGTGTTTTCTGTACATCCCTGGTGAAACGCAAGCCTCAGAAAAGCACAACAAACAATAGAGAAAATCTGTAAAGGGATGCTTCTTCATATCTTTAGCTATTTACCTATCTAATAACACAGAGTGCTACAATATTCTGCAAATGCCTCTTGTCTTAATGTCTGGAATAACttattttcttgctttcctTGAAGATGGCTTTCAGGATCAGTTCcagatattaactgtatttttacaaaaagatttctagaaataatataattaaaatcttCCCTTCTACCGCATCttcttatgttattttatgtccTTTTTACCCCAGATATAAAACTATATTCTAATAGCCGTCACTTTCTCCTCTGTGAACAGAAAGCCAGGTTCTAACTGCAAAGAAAGGAGTCTGCGAGTGATTCTCGAACCCCACAGCCACACTAGCAACAACAGGGGTCTGTTTTTGTCTGCAGCGTGAAGAGCTTGTTTGTAGAGCGTGCTCACACGTCTAACAATGCACACAACATGCAGATTGCACTGAGTTATGTGTAACTGGAACTCCTGCTGGACAAACCCACAGACATGCAAAGAGGACTATATATCATCCGAGGGCAAAACCAACACAGATTGTACATAGACAAAGAAACTCCTTTTTCATAACATACCAAtgcaaacagagacagacagacacgtaTGTCcacacaaatgtaaacagagtAGAAGTATATATTTAGATATGAATGTTACACAGTAACATACTATTCAGGTACACAATAGTAGCACCACAGCCTACTGGAGCGAAAGTGCTCGGCTGCACAGTGTCTGGGCACTGGGCTCTCGGTCCTACGGGCTGGACCGCACTGAACCCTGTGCGTTCAGTCGGgtaaaaagcattttgttgaGCTAATCTACGTCCACTGCCCCAATGTGAGGTATTAAGGAACCGCAAAGATGGTGTGTGGTTTGTGTTAAGGCAATTTaggaacacacaacacagctttAATAGATTACTAGCATGCCTTGCCCTAAAACCCTGAACACATGTTAATATGCAGGCTTCCTGAAACACTGAAGGCCATCCAagagattataaatatgcaaaagaaaatgaatagtaATAAATAGCTTTCTACACCAGTCAGAGCTTCAGGACAATGATGTATCATTGCGAGAGTGAAagtgctgctctgtgtgtgtgaggtctACTGTATCCACCTCCCATTACAAACCCTGCGAGATAATGAAGCAGCAACAGATTTTTCTGTCCAATTTGTTGAGCTGTATgaatgttcattaaaataaataaataaataaaataggtgATTTTCCCCAAGCGATATGGTCACTGAAATCAAAGGCGtctaataaattataaataaacaaataaaaagaccaAATTccccacagaaaacaacacatttcagtgGGGATTTCAGATAAATACAAAAGGGATGAAATCTAACTGAAGGTCCCCAGGGAGCCTTTGAGCATCagaaaggaaaaagtaaaataatctgAGAAGGGGCAGACAATTCTCAATCAGATTCAATATTGATCCTTGCTGTCAGCTATTGGCAATGGTGATTTGCAATCATATCTGGGCAATGATATCTAAAGGCACACTGGACAGAAGAATAACTTTCTGTATACGCCTAGTCCCCCACGAGACCCAAGGGCCTTCGCCAGGATGAGCGTGTTTACAGCCGACCTCGACTAACGATGGCCAGGGCCAAATGGATATAAGCTAGCGGGCTCACCGACGGGACAGACGCCCTCGGCCCGACGCACATGGTCTGAACACCGCGGTCGAGTTTCCTCTGACGGAGTGACAGAGACGCGAGACCCCGAATACTTTTACAGGGACCATTACAAGACAGCCGTGTAACAGGACTATCCCCACAGAGGAAAACATTACTGCTGTGCGAATAAAGGCTGGCAGTTTATAATGACAGAGCCGGACCCGTACCAGGCCACCGCTGGCATCCTCTGATAGCAGGGTGTGTGCTATAACTACAAGGCCCGGTATTGCACAACCTAATGAACCCACAAAGGAATGGGTCACCTAGCATGCCTTTAATAACATTCCCAGTCTAGAAATCTGTGACTGTTACAGGGGGACAAAACTGCACTACTGGTGCTGGGATTATAATTGGAAAAGGGAAAGGCtttcacagtaaaaataaaataaagctggaaaaaaaaatcattccaatgttttttttttttgtttttttttttttaataacaattaaccATCAgaagtaaaaaagtaaaatgaaatagGAATAAGAATagtaagaaaatactttttttctgtacGACAATGTGCATGGTCTCTTCTGCAATACCTGCGGCTGGCCTTCTGAATTTTGACAGTTCTCTCTTTGATCATTCCTCCCAAGAACTGATTGATTCCTCAGGATCTTTAGATTAGAACAGAATGACACTTGAGTGACCTTCCTCTGCAAACACGGTTAGGCATCTACAAACAATCGCTTACGGAGAGCAAGTTACTTCCTGCACAAGCACTCAGTCTGTTAATGTCTTAGTCACATGCGGCCGTCTCTGCAGACGAACTCAACAGTACAGGCTACAGGAGAGCACAGTCTCACTACTACACAGGAGAGAGAAGCTACACGGCAGATAGTTACCTCAGGAGACGCAAACCCTAAGTACTCCCAGTCCCACGTGCCACCTGCAAAACTGCAAATACAAGATAAACAGTATAGCAGGCATGGTTTCTTTCTTCTCTTAACATTTGACAGATTCAATATTTCAGGATTGTGTTGCACTTGCCTACAAGCTAGCAAAACAGCAGACAGAATTCCGCCGCTCTAAGACTCCGGAACAGCAGCAGGTACACGACTCCAGCTTAGATAATTCATCTTCACAACTTAAGttacttatttatatgtatatacaattgttttttttttttgttcagattttCTTTCCTCCCCACAGGCTTATTGCAGGTTAAACTCTAAAGGCCTTACAGATTTAACTGAATTGCAGCACAGtcacaaatacattgttttcttgtaacacagaaaatgtctgttAACAAGCAGGTCTGGGGCATTAAGCTATGTAATACTTCTTGCCTTGCTTTAccagtactcgtattgttattttgatttgccCTATGCTCCAtttcccctggcccttgactgtgacttaacatcttgtctgcacttatcagcttttacagtctaggacgtaagaccttatatattgtttactgtatatgtcgtatacacttgtgtaaattgtgaatttgtaaaatgtattttgccttgaactgcattgtattattgcactttgtattgcgctgatattttataagtcgccctggacaagcacgtttgctaagaaataaataataataataataaaataatatgatacaagagggaaaacaacaacaacaagaacaacaacaacaacaacaacaacaaccagaaCGAGAGAAGAAAGCAACCATAAAAAGAACACAGGCATGTGTCAGagaaaagagggagaggaaggacagagatgagagagagagggtgagagggtgagagagagagagagagagagagagagagagagagggaggaagggaggagggggtaaaatacaggagagagagagagagaggtagagagagatggatagaaATGGGACAGGCAGCCATGCTGAGGGACGCAGGGACAGGGGAGACGGCCCACCTGCGTCGCGGGGCCTCGGGGGAGTCATTGGGGGCCACACCCCGGGCCACGGAGGCCAGGAACTCCTGCCGCTTCTGCTGCACCAGGCAGGCGGCGCGCACAATCTTATGCCGCGGCGTGCGCAGGTACGGCCGGTTCACCTTCTGGGCCAGGTCCTCCGTCACCATCTCCAGGTCAGTGCATGAGCTCAAAAATCTCTTTCTTTGTGCTTTTGGGTTCCAGAAAGAATCCGTAGGGGTAAGAGCACTTGAGGATGCGCCTGGTCTTCAGCAGCTCGTGCACGGCGTCTTCAATGAAGGTGGTGTCGGGGGGGCCGCCCTCCCCTGCggacacagaacacagaacacggGCCGGGGAAGGCGAGGCTGAGCGCACAGATCAAGTATGTCCGCATCCAGCGTGAACTCACAAGCATAGTAAAGCCCCCCCGTGGTCagcaggggggcggggggctcGAGTCTCACTTACGTCCGCTCAGTGCCCGGCTCAGCTGCTCCATCTTCTCTTTGGCGGTTTTCAGAAGTCGCTGCTCGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108097 True 5120 TUCP 0.46 3 20329422 20335304

Neighbor

gene id symbol gene type direction distance location
AMCG00021519 krit1 coding downstream 31772 20287321 ~ 20297650 (-)
AMCG00021515 LOC106570209 coding downstream 50047 20275058 ~ 20279375 (-)
AMCG00021516 NA coding downstream 121946 20206322 ~ 20207476 (-)
AMCG00021509 NA coding downstream 367325 19951017 ~ 19962097 (-)
AMCG00021508 NA coding downstream 419749 19905943 ~ 19909673 (-)
AMCG00021521 NA coding upstream 36496 20371800 ~ 20376570 (-)
AMCG00021520 NA coding upstream 43119 20378423 ~ 20389444 (-)
AMCG00021524 fam133b coding upstream 67479 20402783 ~ 20412472 (-)
AMCG00021523 cdk6,LOC106588946,LOC107567973,LOC107667775,LOC107558583 coding upstream 79226 20414530 ~ 20435051 (-)
AMCG00021525 cdk6,LOC107667775,LOC107558583,LOC107722162,LOC107567973 coding upstream 109239 20444543 ~ 20460278 (-)
G86530 NA non-coding downstream 176655 20152220 ~ 20152767 (-)
G86477 NA non-coding downstream 410619 19912537 ~ 19918803 (-)
G86472 NA non-coding downstream 417019 19903996 ~ 19912403 (-)
G86474 NA non-coding downstream 428586 19900458 ~ 19900836 (-)
G86386 NA non-coding downstream 880928 19446417 ~ 19448494 (-)
G86639 NA non-coding upstream 19766 20355070 ~ 20356479 (-)
G86648 NA non-coding upstream 57740 20393044 ~ 20394206 (-)
G86689 NA non-coding upstream 277359 20612663 ~ 20614108 (-)
G86736 NA non-coding upstream 486328 20821632 ~ 20822603 (-)
G86738 NA non-coding upstream 487696 20823000 ~ 20823964 (-)
AMCG00021514 NA other downstream 44443 20281152 ~ 20284979 (-)
AMCG00021495 acbd7,LOC106595206 other downstream 860640 19446086 ~ 19468782 (-)
G86327 NA other downstream 1051399 19275354 ~ 19278023 (-)
AMCG00021483 NA other downstream 1054982 19259434 ~ 19274440 (-)
G86241 NA other downstream 1419514 18821533 ~ 18909908 (-)
G86640 NA other upstream 22997 20358301 ~ 20360255 (-)
G86649 NA other upstream 60308 20395612 ~ 20397783 (-)
AMCG00021534 bet1,LOC107669829,LOC107722155 other upstream 386580 20721884 ~ 20724880 (-)
G86808 NA other upstream 728554 21063858 ~ 21083570 (-)
AMCG00021569 NA other upstream 1331098 21666402 ~ 21671315 (-)

Expression


Co-expression Network