G86601


Basic Information

Item Value
gene id G86601
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 20342610 ~ 20401249 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU108100
taattaataaacacggcatcatgtttatttgtgactctttaataaacactttacaaatataatggTTTGAGAACTTGAGAAAAATGTTAACGAAGGGCCGACAgcactgatttgttttaaataaaatccacagCAGGCAGAGCCAAACGAACATGGAGGGGACGGGCAGAAGCAATCAACTCCCTGCATGAACGAAGAACTTCTTCTCAAGTAAGATTCAGTAACAGATAGAACCAGGAGAAAACtaaaactctctctctgtctctctctcacacacacacacacacacagacaccaccTTTCTTTCTCAAGGTTTTGAAATCATATCCTCTCCAACTGCTGAGTGTCACAATGGACAGATCACGAGTGTGTGTGTCGGCTCTGGGACGGTATCTTAGTCCCCCATTCCTTCGGTCACTCTGCGTTTCTGCCCCCCCAGGCGTCCGTCTTATGAGCTGAGGGGATGCTCCAGTGCTTTCTCTTACACCCAGTGGAGAAGGCGTCACACTTGTAGCTGAACGGACAGCAGTGGACTCCGTCTTTGCAGCATTCGGCCTGTGTCAAACAGAGCAACGTGGCGGGTGAGGACCGATACAGGAGTAAGAGACACTAAACTCACCGTTCACTTCCTCAGAGAATTACAGTCACTCGAGTGGATTAGTAACCGTGTCCTAATTACAGCCATAATTAAATCACATTCACccagacatacacagacagcGGTGAATGAAATTACCAGTGGGAATGGGCAGCAACCCCAGACGCCATCGGGCTTCTTGCAGCAGGTGTTGTTGGGGGGGCAGTAATGCTCGCTGTCACAGCGAATGACGGAGCCGTCGGCCATTCCTCTGAGCGCCTCGCCCCGTGGACCCCTCTCCTGGCACTGCCGCCTGCCGTCACAGCCGGAGCCCCTCGCAGCACTGCGGGcgctgcagcagctcctccccACAGGGGCGGCGATGCTGTGGTTGTGGTTGGATTCGATGGCCGCCGTCTTCCTCAGCATCGGGACTCTTTCTGCCTCACCGGCTCGCTCACACATCATGGTCGCCACGTTGCAGCTGTAGCCTTCTGGGCAGCAGTGGCGCTGGTCGGGGCAGCACACAgcctgtaaacacacacacacacacacagcctgtaaacacacacaaacacacacacacacacagagcctacaaacacatacacaaatccTGAAAACACACAGCCTGAATTCCATAGGTTACATTTCCGATTACAGCAGCCATGATAATGGGTAAATCAGTAGAACACGTGTGTTAACAATCACAGATCGCTGCTTGCTGAGGGCCCATGACGGTGTCTGTCTGAAGCCTTGAAGAGAAACAGTCAAAGCGCCAGTTTTCAGTGGATCTGTGGCTAAATAAGAGCGCCTACTATAACGGAGAGGATACAAAAACGGGAAGCGCAacttatacataaaaaaagcgCACGAAGAACAGAAACTGTCCCAGAGCTGCTTTCAATCAGGGACACACATACCTGCAGATGAAACATACGGGCCCTCAGAATGACTGTGGGTCTCCTCGTGTCAATTAACACTGCATTGACACCTGAGATAGAACCACACAAATTGGATGTTTCCATCAACATAAAGCAATATACAATTATGAATATGGCATGCCATCATTAGTATCATTGCTGCAGTTTCTTCttgctattttcatttttaaagctttctaaataaaaatgtatgttttctcgCTTCCTTTTACTTCTTGCCTCGGCTCCAGCGACATTGACCGGCCCGTAGTCTTACCTTCGGGATCGGGCAGCACTGGTACCCACTCGGGGACGGGCAGCAGGTCGACCTTTCCGGACAGTGTCTCCCATCTGGACAGGTCACAGAACCGCTGGCCAGTCCCACCAGCAACACCAGTACACTGGCTCTCAGCATC
>TU108101
tctctctctctctctctctctctcacacacacacacacacacacacacacagacaccaccTTTCTTTCTCAAGGTTTTGAAATCATATCCTCTCCAACTGCTGAGTGTCACAATGGACAGATCACGAGTGTGTGTGTCGGCTCTGGGACGGTATCTTAGTCCCCCATTCCTTCGGTCACTCTGCGTTTCTGCCCCCCCAGGCGTCCGTCTTATGAGCTGAGGGGATGCTCCAGTGCTTTCTCTTACACCCAGTGGAGAAGGCGTCACACTTGTAGCTGAACGGACAGCAGTGGACTCCGTCTTTGCAGCATTCGGCCTGTGAATGGGCAGCAACCCCAGACGCCATCGGGCTTCTTGCAGCAGGTGTTGTTGGGGGGGCAGTAATGCTCGCTGTCACAGCGAATGACGGAGCCGTCGGCCATTCCTCTGAGCGCCTCGCCCCGTGGACCCCTCTCCTGGCACTGCCGCCTGCCGTCACAGCCGGAGCCCCTCGCAGCACTGCGGGcgctgcagcagctcctccccACAGGGGCGGCGATGCTGTGGTTGTGGTTGGATTCGATGGCCGCCGTCTTCCTCAGCATCGGGACTCTTTCTGCCTCACCGGCTCGCTCACACATCATGGTCGCCACGTTGCAGCTGTAGCCTTCTGGGCAGCAGTGGCGCTGGTCGGGGCAGCACACAgcctgtaaacacacacacacacacacagcctgtaaacacacacaaacacacacacacacacagagcctacaaacacatacacaaatccTGAAAACACACAGCCTGAATTCCATAGGTTACATTTCCGATTACAGCAGCCATGATAATGGGTAAATCAGTAGAACACGTGTGTTAACAATCACAGATCGCTGCTTGCTGAGGGCCCATGACGGTGTCTGTCTGAAGCCTTGAAGAGAAACAGTCAAAGCGCCAGTTTTCAGTGGATCTGTGGCTAAATAAGAGCGCCTACTATAACGGAGAGGATACAAAAACGGGAAGCGCAacttatacataaaaaaagcgCACGAAGAACAGAAACTGTCCCAGAGCTGCTTTCAATCAGGGACACACATACCTGCAGATGAAACATACGGGCCCTCAGAATGACTGTGGGTCTCCTCGTGTCAATTAACACTGCATTGACACCTGAGATAGAACCACACAAATTGGATGTTTCCATCAACATAAAGCAATATACAATTATGAATATGGCATGCCATCATTAGTATCATTGCTGCAGTTTCTTCttgctattttcatttttaaagctttctaaataaaaatgtatgttttctcgCTTCCTTTTACTTCTTGCCTCGGCTCCAGCGACATTGACCGGCCCGTAGTCTTACCTTCGGGATCGGGCAGCACTGGTACCCACTCGGGGACGGGCAGCAGGTCGACCTTTCCGGACAGTGTCTCCCATCTGGACAGGTCACAGAACCGCTGGCCAGTCCCACCAGCAACACCAGTACACTGGCTCTCAGCATC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU108100 True 1916 TUCP 0.50 2 20398926 20401249
TU108101 False 1494 TUCP 0.52 4 20342610 20401249

Neighbor

gene id symbol gene type direction distance location
AMCG00021518 NA coding upstream 2872 20314180 ~ 20339738 (+)
AMCG00021513 NA coding upstream 68227 20214149 ~ 20274383 (+)
AMCG00021512 fzd1,LOC106605515,LOC105910048,LOC107565291 coding upstream 228515 20112413 ~ 20114095 (+)
AMCG00021511 cdk14 coding upstream 284825 20022522 ~ 20057785 (+)
AMCG00021507 NA coding upstream 360181 19975603 ~ 19982429 (+)
AMCG00021526 NA coding downstream 79962 20481211 ~ 20493174 (+)
AMCG00021527 vps50 coding downstream 104776 20506025 ~ 20524326 (+)
AMCG00021530 vps50 coding downstream 130919 20532168 ~ 20550930 (+)
AMCG00021529 NA coding downstream 153244 20554493 ~ 20563626 (+)
AMCG00021528 vps50 coding downstream 176444 20577693 ~ 20589296 (+)
G86573 NA non-coding upstream 43828 20298462 ~ 20298782 (+)
G86536 NA non-coding upstream 137072 20205192 ~ 20205538 (+)
G86529 NA non-coding upstream 189844 20152245 ~ 20152766 (+)
G86455 NA non-coding upstream 447991 19852369 ~ 19894619 (+)
G86454 NA non-coding upstream 504797 19829816 ~ 19837813 (+)
G86625 NA non-coding downstream 7155 20408404 ~ 20409658 (+)
G86633 NA non-coding downstream 61006 20462255 ~ 20462991 (+)
G86665 NA non-coding downstream 99537 20500786 ~ 20501303 (+)
G86668 NA non-coding downstream 107259 20508508 ~ 20547410 (+)
G86685 NA non-coding downstream 211377 20612626 ~ 20614365 (+)
G86407 NA other upstream 841368 19499800 ~ 19501242 (+)
AMCG00021485 NA other upstream 1047831 19279765 ~ 19294779 (+)
AMCG00021472 NA other upstream 1287507 19047049 ~ 19055103 (+)
G86121 NA other upstream 2092924 18248490 ~ 18249686 (+)
AMCG00021441 NA other upstream 2869214 17470325 ~ 17473396 (+)
G86688 NA other downstream 266221 20667470 ~ 20667927 (+)
AMCG00021539 pdk4,LOC107722149 other downstream 507568 20908817 ~ 20912002 (+)
AMCG00021550 NA other downstream 697170 21098419 ~ 21109368 (+)
AMCG00021551 NA other downstream 757375 21158624 ~ 21165500 (+)
AMCG00021561 LOC106582151,LOC105891776,LOC106605261 other downstream 828603 21229852 ~ 21232853 (+)

Expression


Co-expression Network