G86616


Basic Information

Item Value
gene id G86616
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 20378423 ~ 20380424 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU108117
TTGATTACTGAGATTTTATTCCACTGTATTGTAACACATGGGGAACAGGTTCACTTCATTGACAGTAACTTACAAGGTTAACATTGGGATGTCATGGATCATGGATGTCATTCCCAGTTACAGGGGGCAGTCATGACGTCACAACAGTCTTAGAACCGACGAGTAAATAATGCATTGTGATCGAAGCTACTCCTGATCGCGCCTCTGTGATTTGGTCCTCAATTGCACACATCCAGAGGGGTACATTAGAAATGCTTTCACTGCCTCTGCAGATGACAACACCACCCAGCTCTCCTACAGTGTACAGTCAGATAAACTGTGAAAATTAAAGTCATAGCTATTCCCAAacaaaaatgattattaaagaGGTGTGCGTCCCTCTGTAAGACTTTCCTTCGATTAATAACACAATCCTCACTGCGGTGCTCAGGAAGTCCGGACCGCAACGGATCCCAGCTGCACGACTCAAATTCCTGCCAAGGAAAATTAGGAGGCAAACGTGGAATCTGCAGGTGGATGGAGCCCCGGAATAATTCCGGGCTCTCTCGGCTTCGGTTCACACAGGAGTTGGAGATGCACAGTGCAGCGGTGGGAGTGAAGAGCCTCAGGGTGGCCTGCCgtgtctctccgtctctctccctctctgtctctatgCTAGGGTCACTCTCTGGCCGGCTTTAAACGTGGCCAAGCCCGGCGTCTTGCCGTCACAGGAGCTTCCGAAGGCGTTGTACCTGCGAGGACACGGGGAGGGAAGAGAGCCGGGGTCCTGTTTGCTGATGGAGGCTCTGGTGGCGGTCAGGGCCGCGCTCAGGTGTGATTGACAGATGGGGAAGGCGGGCTTGATGGGCCCGGCCTGCACGAGGATCGAGTCATCctgcagacagagggagagagacagcgcCGGTGAGCAGCAAGTCGCACCCCCTCTCCCAGGCACCCCCGAGATGTGGGCGGAAGCGCGGGCCGCCTCACCGTGGCTCGGACACGGTAGTTGCTCTTGAGGTGGCCAATCTCCGCCCGCAGTCGCTCGATCTGCTCGTGGCCGAGCTCCTGGAAACCCTCCTGCAGGGAGGCCATGAAGACCGGAGCCTGGGATGAGCCGGGGTCCCGCAGGGAGGTGCCCGTCAGGTCGTGGGTCATCGAGTTGGGTCCCGACAGGCACTGCGAGTTTGATATCACTACTGCTGCGATGCCTGTGCGTTCAAACCCATCCAGAGAGACGTTCCCGTCTAGTAACATTAACTCTCATCATCAATCGTCTCCTCGTTTCCACTGCAGTGGCTGgccagctgtgctgtgctttcAGCCCACAGGGTGTGTGTTCATTCAGGGCTATCATCTCTCATCACAACCACAGCGTATCGCCTGACCAGCTCCGAGGGTGAGGCGTTCCCCAGCTCTGACTCGTAGGAGCTGCCGAAGTAGaggcgccagacattgtgccgCGGGTCCTCGGGCAGCAGCTCAGCCGAATCCAGCAGCACCATGGAGTTCTCCAGTGCGCCCTCGCCCTCCCCTGCCGAGTCGTCCGAGCCGCTGCTGTGGTTCAGGAAGATCATGGAGGACAGGCTGACGTCGCTGTCCGAGCCGCAGCCCCCGTCCTGTGGCAGGGAGGAGGGCAGGAGGTCAACACGCAGTCAGGGGtttcaacacacacatgcacaaaggTGTAACGCTGGAGCAACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108117 True 1689 TUCP 0.57 3 20378423 20380424

Neighbor

gene id symbol gene type direction distance location
AMCG00021518 NA coding upstream 38685 20314180 ~ 20339738 (+)
AMCG00021513 NA coding upstream 104040 20214149 ~ 20274383 (+)
AMCG00021512 fzd1,LOC106605515,LOC105910048,LOC107565291 coding upstream 264328 20112413 ~ 20114095 (+)
AMCG00021511 cdk14 coding upstream 320638 20022522 ~ 20057785 (+)
AMCG00021507 NA coding upstream 395994 19975603 ~ 19982429 (+)
AMCG00021522 NA coding downstream 9333 20389757 ~ 20393261 (+)
AMCG00021526 NA coding downstream 100787 20481211 ~ 20493174 (+)
AMCG00021527 vps50 coding downstream 125601 20506025 ~ 20524326 (+)
AMCG00021530 vps50 coding downstream 151744 20532168 ~ 20550930 (+)
AMCG00021529 NA coding downstream 174069 20554493 ~ 20563626 (+)
G86573 NA non-coding upstream 79641 20298462 ~ 20298782 (+)
G86536 NA non-coding upstream 172885 20205192 ~ 20205538 (+)
G86529 NA non-coding upstream 225657 20152245 ~ 20152766 (+)
G86455 NA non-coding upstream 483804 19852369 ~ 19894619 (+)
G86454 NA non-coding upstream 540610 19829816 ~ 19837813 (+)
G86625 NA non-coding downstream 27980 20408404 ~ 20409658 (+)
G86633 NA non-coding downstream 81831 20462255 ~ 20462991 (+)
G86665 NA non-coding downstream 120362 20500786 ~ 20501303 (+)
G86668 NA non-coding downstream 128084 20508508 ~ 20547410 (+)
G86685 NA non-coding downstream 232202 20612626 ~ 20614365 (+)
AMCG00021517 gatad1 other upstream 6887 20368153 ~ 20371536 (+)
G86407 NA other upstream 877181 19499800 ~ 19501242 (+)
AMCG00021485 NA other upstream 1083644 19279765 ~ 19294779 (+)
AMCG00021472 NA other upstream 1323320 19047049 ~ 19055103 (+)
G86121 NA other upstream 2128737 18248490 ~ 18249686 (+)
G86688 NA other downstream 287046 20667470 ~ 20667927 (+)
AMCG00021539 pdk4,LOC107722149 other downstream 528393 20908817 ~ 20912002 (+)
AMCG00021550 NA other downstream 717995 21098419 ~ 21109368 (+)
AMCG00021551 NA other downstream 778200 21158624 ~ 21165500 (+)
AMCG00021561 LOC106582151,LOC105891776,LOC106605261 other downstream 849428 21229852 ~ 21232853 (+)

Expression


Co-expression Network