G86625


Basic Information

Item Value
gene id G86625
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 20408404 ~ 20409658 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU108128
CCAGGCTCTGCCCCTTCACATCTTTTACTGAAACAGAATCACACACAGCAGTTTACACAGAGGGGGGTCTTACCTCATCCTCAGACTCAGAGGAGCTGCTAGAAGAATCAGAACTtgatgaagaggaggaagatgaagaaTGCTTGACCAAACACAATAAAAGCAGAGCTCATGAGATTTTACATCATTCACAGCACATCCACAAAAGCATTTTGCACTAAATGTTAAAATTGGCTTACAAAGaagacaggaaacaggaaaatgAACGAGTCTCGTTCGAACAGGACTCGCTAGAAGTAAGAGCTCAGTGTGACAGACACAGAATCACAATCACAGTCAAGAGGTGgtgtttattattactttaactTTGAGATCAAGCTATTAAAACTCAGTCTGCTCAAGGAAGCCAGCGGTGGCTGAATTCCCTGCTTTGGTCAGTTCCAACCACATTCATATTAACCCAGGAATACAAAAACTGAGGGACAAACTAAAAGGCAGAAACATTATATACTGTGTTTTGGAAAGCTTTTCTCACCCTGTTGgatttcttcttctctttccgttttttCCTCTTTCTTTTTGGAAGCACTGTCAGACCCTCCGAGGACCTTCTCCCTGTGTTTCTCCAGCTCCTTCTTCCATTTCTACAGAGGCAATTGAAGAGAAAGGAAGCTGCTAACAAATCCTGTATTTTCACAGTGCCAAGAGTGCGATGCCATGTTTTCATCATTAGTCTTAAAGTATTACACGATTTAACATGTACATagcaacaaaaataattcacaacATTATGTGAAATCACAcagccttttttaaatgttattgctATTTAGTAGATTAAAGGTTAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108128 True 850 lncRNA 0.40 2 20408404 20409658

Neighbor

gene id symbol gene type direction distance location
AMCG00021522 NA coding upstream 15143 20389757 ~ 20393261 (+)
AMCG00021518 NA coding upstream 68666 20314180 ~ 20339738 (+)
AMCG00021513 NA coding upstream 134021 20214149 ~ 20274383 (+)
AMCG00021512 fzd1,LOC106605515,LOC105910048,LOC107565291 coding upstream 294309 20112413 ~ 20114095 (+)
AMCG00021511 cdk14 coding upstream 350619 20022522 ~ 20057785 (+)
AMCG00021526 NA coding downstream 71553 20481211 ~ 20493174 (+)
AMCG00021527 vps50 coding downstream 96367 20506025 ~ 20524326 (+)
AMCG00021530 vps50 coding downstream 122510 20532168 ~ 20550930 (+)
AMCG00021529 NA coding downstream 144835 20554493 ~ 20563626 (+)
AMCG00021528 vps50 coding downstream 168035 20577693 ~ 20589296 (+)
G86573 NA non-coding upstream 109622 20298462 ~ 20298782 (+)
G86536 NA non-coding upstream 202866 20205192 ~ 20205538 (+)
G86529 NA non-coding upstream 255638 20152245 ~ 20152766 (+)
G86455 NA non-coding upstream 513785 19852369 ~ 19894619 (+)
G86454 NA non-coding upstream 570591 19829816 ~ 19837813 (+)
G86633 NA non-coding downstream 52597 20462255 ~ 20462991 (+)
G86665 NA non-coding downstream 91128 20500786 ~ 20501303 (+)
G86668 NA non-coding downstream 98850 20508508 ~ 20547410 (+)
G86685 NA non-coding downstream 202968 20612626 ~ 20614365 (+)
G86687 NA non-coding downstream 210848 20620506 ~ 20620721 (+)
G86601 NA other upstream 7155 20342610 ~ 20401249 (+)
G86616 NA other upstream 27980 20378423 ~ 20380424 (+)
AMCG00021517 gatad1 other upstream 36868 20368153 ~ 20371536 (+)
G86407 NA other upstream 907162 19499800 ~ 19501242 (+)
AMCG00021485 NA other upstream 1113625 19279765 ~ 19294779 (+)
G86688 NA other downstream 257812 20667470 ~ 20667927 (+)
AMCG00021539 pdk4,LOC107722149 other downstream 499159 20908817 ~ 20912002 (+)
AMCG00021550 NA other downstream 688761 21098419 ~ 21109368 (+)
AMCG00021551 NA other downstream 748966 21158624 ~ 21165500 (+)
AMCG00021561 LOC106582151,LOC105891776,LOC106605261 other downstream 820194 21229852 ~ 21232853 (+)

Expression


Co-expression Network