Gene
RNA
| Item | Value |
|---|---|
| gene id | G86633 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030130.1 |
| NCBI id | CM030130.1 |
| chromosome length | 39556810 |
| location | 20462255 ~ 20462991 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0007185 | transmembrane receptor protein tyrosine phosphatase signaling pathway | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU108136 | True | 737 | lncRNA | 0.36 | 1 | 20462255 | 20462991 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00021522 | NA | coding | upstream | 68994 | 20389757 ~ 20393261 (+) |
| AMCG00021518 | NA | coding | upstream | 122517 | 20314180 ~ 20339738 (+) |
| AMCG00021513 | NA | coding | upstream | 187872 | 20214149 ~ 20274383 (+) |
| AMCG00021512 | fzd1,LOC106605515,LOC105910048,LOC107565291 | coding | upstream | 348160 | 20112413 ~ 20114095 (+) |
| AMCG00021511 | cdk14 | coding | upstream | 404470 | 20022522 ~ 20057785 (+) |
| AMCG00021526 | NA | coding | downstream | 18220 | 20481211 ~ 20493174 (+) |
| AMCG00021527 | vps50 | coding | downstream | 43034 | 20506025 ~ 20524326 (+) |
| AMCG00021530 | vps50 | coding | downstream | 69177 | 20532168 ~ 20550930 (+) |
| AMCG00021529 | NA | coding | downstream | 91502 | 20554493 ~ 20563626 (+) |
| AMCG00021528 | vps50 | coding | downstream | 114702 | 20577693 ~ 20589296 (+) |
| G86625 | NA | non-coding | upstream | 52597 | 20408404 ~ 20409658 (+) |
| G86573 | NA | non-coding | upstream | 163473 | 20298462 ~ 20298782 (+) |
| G86536 | NA | non-coding | upstream | 256717 | 20205192 ~ 20205538 (+) |
| G86529 | NA | non-coding | upstream | 309489 | 20152245 ~ 20152766 (+) |
| G86455 | NA | non-coding | upstream | 567636 | 19852369 ~ 19894619 (+) |
| G86665 | NA | non-coding | downstream | 37795 | 20500786 ~ 20501303 (+) |
| G86668 | NA | non-coding | downstream | 45517 | 20508508 ~ 20547410 (+) |
| G86685 | NA | non-coding | downstream | 149635 | 20612626 ~ 20614365 (+) |
| G86687 | NA | non-coding | downstream | 157515 | 20620506 ~ 20620721 (+) |
| G86695 | LOC103362787 | non-coding | downstream | 236223 | 20699214 ~ 20702457 (+) |
| G86601 | NA | other | upstream | 61006 | 20342610 ~ 20401249 (+) |
| G86616 | NA | other | upstream | 81831 | 20378423 ~ 20380424 (+) |
| AMCG00021517 | gatad1 | other | upstream | 90719 | 20368153 ~ 20371536 (+) |
| G86407 | NA | other | upstream | 961013 | 19499800 ~ 19501242 (+) |
| AMCG00021485 | NA | other | upstream | 1167476 | 19279765 ~ 19294779 (+) |
| G86688 | NA | other | downstream | 204479 | 20667470 ~ 20667927 (+) |
| AMCG00021539 | pdk4,LOC107722149 | other | downstream | 445826 | 20908817 ~ 20912002 (+) |
| AMCG00021550 | NA | other | downstream | 635428 | 21098419 ~ 21109368 (+) |
| AMCG00021551 | NA | other | downstream | 695633 | 21158624 ~ 21165500 (+) |
| AMCG00021561 | LOC106582151,LOC105891776,LOC106605261 | other | downstream | 766861 | 21229852 ~ 21232853 (+) |
