G86665


Basic Information

Item Value
gene id G86665
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 20500786 ~ 20501303 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU108173
tggggagcgaaggctggcccgtgtggtccgatccaacagacgagctactgtagctcaaactgctgaaaaagtgaatgctggttctgatagaaaggtgtcagaacacacagtgcatcgcagtttgttgcgtaatGGGGCTGCgcagccgcagaccagtcagggtgcccatgctgacccctgtgcactgccgaaagcgcctacaatgggcatgtgagcatcagaactggaccacggagcaatggaggaaggtggcctggtctgatgaatcatgagttcaaggtgttgacttggcctccaaattccccagatctcaatcctatcgagcatctgtgggatgtgctggacaaacaagtccgatccatggaggccccacctcgcaacttacaggacttaaaggatctgctgctaacgtcttggtgccagataccacagcacaccttcagaggtctagtggagtccacgcctcgacgggtcaggactgttttggcGGCGGCTGTTttggacctacacaatattag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108173 True 518 lncRNA 0.54 1 20500786 20501303

Neighbor

gene id symbol gene type direction distance location
AMCG00021526 NA coding upstream 7612 20481211 ~ 20493174 (+)
AMCG00021522 NA coding upstream 107525 20389757 ~ 20393261 (+)
AMCG00021518 NA coding upstream 161048 20314180 ~ 20339738 (+)
AMCG00021513 NA coding upstream 226403 20214149 ~ 20274383 (+)
AMCG00021512 fzd1,LOC106605515,LOC105910048,LOC107565291 coding upstream 386691 20112413 ~ 20114095 (+)
AMCG00021527 vps50 coding downstream 4722 20506025 ~ 20524326 (+)
AMCG00021530 vps50 coding downstream 30865 20532168 ~ 20550930 (+)
AMCG00021529 NA coding downstream 53190 20554493 ~ 20563626 (+)
AMCG00021528 vps50 coding downstream 76390 20577693 ~ 20589296 (+)
AMCG00021532 LOC103394147,LOC106952338,LOC107383304,LOC107085850 coding downstream 201801 20703104 ~ 20721264 (+)
G86633 NA non-coding upstream 37795 20462255 ~ 20462991 (+)
G86625 NA non-coding upstream 91128 20408404 ~ 20409658 (+)
G86573 NA non-coding upstream 202004 20298462 ~ 20298782 (+)
G86536 NA non-coding upstream 295248 20205192 ~ 20205538 (+)
G86529 NA non-coding upstream 348020 20152245 ~ 20152766 (+)
G86668 NA non-coding downstream 7205 20508508 ~ 20547410 (+)
G86685 NA non-coding downstream 111323 20612626 ~ 20614365 (+)
G86687 NA non-coding downstream 119203 20620506 ~ 20620721 (+)
G86695 LOC103362787 non-coding downstream 197911 20699214 ~ 20702457 (+)
G86727 NA non-coding downstream 399724 20901027 ~ 20902855 (+)
G86601 NA other upstream 99537 20342610 ~ 20401249 (+)
G86616 NA other upstream 120362 20378423 ~ 20380424 (+)
AMCG00021517 gatad1 other upstream 129250 20368153 ~ 20371536 (+)
G86407 NA other upstream 999544 19499800 ~ 19501242 (+)
AMCG00021485 NA other upstream 1206007 19279765 ~ 19294779 (+)
G86688 NA other downstream 166167 20667470 ~ 20667927 (+)
AMCG00021539 pdk4,LOC107722149 other downstream 407514 20908817 ~ 20912002 (+)
AMCG00021550 NA other downstream 597116 21098419 ~ 21109368 (+)
AMCG00021551 NA other downstream 657321 21158624 ~ 21165500 (+)
AMCG00021561 LOC106582151,LOC105891776,LOC106605261 other downstream 728549 21229852 ~ 21232853 (+)

Expression


Co-expression Network