G86688



Basic Information


Item Value
gene id G86688
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 20667470 ~ 20667927 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU108198
TGTATGAAACCGGCTGAATGTGCAGATAAAGCTGGCAGCTCAATCCAGTGGCGGGGAGTTTGCAGGATCTACAATCCGGAGCGCACGGAGTCCCGTTTGCCAGTCAATCCCATCGCCAGAGATGCGGCTCTCttcctttctgtcttttctgtCTCACAACTGCATGCGCTCTGGTGTCGgggttggaggggggggggtccaCTTCAGGCAAAACAACAATTTGGTGAGACGAAAGCCATGGCAATTAATTTGCAATAATGCATGTGTTTCTTTTCCTGTCTCTAATGACTGGCTGCTCCAGGTGGCAGTGCCAGTGCTCAGTGCGCACACCGGTAATCCTGCGGGCGGAGAGGCGCACAGTGCGCGCAGTGGGGCGGCTGCAGGGACCTCCTCCTCGGGCAGGGCGGCTGGGGAGCTCCGGTCCTCTTAAAGACGCCCTGTGCGCCGCTGCCTCcgac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU108198 True 458 TUCP 0.58 1 20667470 20667927

Neighbor


gene id symbol gene type direction distance location
AMCG00021528 vps50 coding upstream 78174 20577693 ~ 20589296 (+)
AMCG00021529 NA coding upstream 103844 20554493 ~ 20563626 (+)
AMCG00021530 vps50 coding upstream 116540 20532168 ~ 20550930 (+)
AMCG00021527 vps50 coding upstream 143144 20506025 ~ 20524326 (+)
AMCG00021526 NA coding upstream 174296 20481211 ~ 20493174 (+)
AMCG00021532 LOC103394147,LOC106952338,LOC107383304,LOC107085850 coding downstream 35177 20703104 ~ 20721264 (+)
AMCG00021535 NA coding downstream 66787 20734714 ~ 20782173 (+)
AMCG00021537 col1a2,LOC107722140,LOC107667770,LOC107591591,LOC107731699 coding downstream 129771 20797698 ~ 20827291 (+)
AMCG00021536 NA coding downstream 161926 20829853 ~ 20842424 (+)
AMCG00021541 ppp1r9a,LOC107722146 coding downstream 207196 20875123 ~ 20886781 (+)
G86687 NA non-coding upstream 46749 20620506 ~ 20620721 (+)
G86685 NA non-coding upstream 53105 20612626 ~ 20614365 (+)
G86668 NA non-coding upstream 120060 20508508 ~ 20547410 (+)
G86665 NA non-coding upstream 166167 20500786 ~ 20501303 (+)
G86633 NA non-coding upstream 204479 20462255 ~ 20462991 (+)
G86695 LOC103362787 non-coding downstream 31287 20699214 ~ 20702457 (+)
G86727 NA non-coding downstream 233100 20901027 ~ 20902855 (+)
G86800 NA non-coding downstream 367175 21035102 ~ 21038425 (+)
G86833 LOC107754811,LOC107672863,LOC107731557 non-coding downstream 504163 21172090 ~ 21175659 (+)
G86859 NA non-coding downstream 569174 21237101 ~ 21238163 (+)
G86601 NA other upstream 266221 20342610 ~ 20401249 (+)
G86616 NA other upstream 287046 20378423 ~ 20380424 (+)
AMCG00021517 gatad1 other upstream 295934 20368153 ~ 20371536 (+)
G86407 NA other upstream 1166228 19499800 ~ 19501242 (+)
AMCG00021485 NA other upstream 1372691 19279765 ~ 19294779 (+)
AMCG00021539 pdk4,LOC107722149 other downstream 240890 20908817 ~ 20912002 (+)
AMCG00021550 NA other downstream 430492 21098419 ~ 21109368 (+)
AMCG00021551 NA other downstream 490697 21158624 ~ 21165500 (+)
AMCG00021561 LOC106582151,LOC105891776,LOC106605261 other downstream 561925 21229852 ~ 21232853 (+)
G86861 mios,LOC106605261,LOC106582151 other downstream 567143 21235070 ~ 21236080 (+)

Expression



Co-expression Network