G86695 (LOC103362787)


Basic Information

Item Value
gene id G86695
gene name LOC103362787
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 20699214 ~ 20702457 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU108205
TTGAAACCTTTAATATTATATGAGATGtgttaaataaactgtagaTCTCGGTTTAATCAGATTAAGAGATTAAGATGTTTATACAGATTACTTTAAAACCCAGACTGGAGAGGGGCTGCAGGTCTCTTTAGGGCTGTACCAGCGAGCCGAGGAGCGGGCAGGGACAGAGGGCAGCTCACTTTAAGTGGCGAAAATGCCCGTAATTAATGTGGACGATTTGACAGACAAGGATAAACTCAAAATGGAAGTAGATCAACTGAAGATCGAGGTGAAACTCGAGAGAGCGCTGGTCTCCAAATGCTGTGAGGAGGTGCGAGATTACATCGAAAGTGGATCAGGTGAGGATCCCCTCGTGAAAGGAATTCCTGAGGAGAAGAACCCATTCAAGGAGAAGGgaggctgtgtgctgtgttaaCCTGGATGGCAGAGAAGAACTTCCTTTACTTTAGGAGACATGGACACCTATAACATTGGATCACAGCAGTGATAGCCAAGATTCAAGAAACACCCAAAAACAAATTCTCACCTTGCACCACATCAGTCTGTGTTTCCCAAAACAGTGCATTTAAATCCCTATTTAAAGTGATATAGTAACATATGAAATACTGTGCAATGATTGTGAGCTTCGTTAGATGGAATATGTTTAATTTCCCTGAGACCCTGTTGTCTCTGCACCATCTGTTTCAGTGCCCAACGTAACACTTTCATTAAATGAGCTTGTTTACAACAGGACAGTGCTTTTTTTGGGGTCCCAAATGTTTAaggatttgatttttatttacagaagaaaaatacatattgttgaAATTGGTATAATTATactatgttgtttttcttttctgaagattaaaactgaatttaatataataagttGAAAGCGCAATTGTAGTTCTCGCAGGACGAGATCTGGAGATAAAGTATTCCTTTTGATATATCCAGACCAAGTCAAAACCCAGTTGACACAGCTGCCAATCACACATTCAGTACCAGCACCTGACAGAGGATGCTTTCATCTACTTCCCATCAAGTGCTTTGCTATGAATATATGAAGGGTGGGTTGGTTAAAGCTTTGATTTGATCAGGGCCTGGCAATCAGTTTGGAAGCAGCATGCATTAGGGACTGGGAATTGGGAAACCTTCCTGATTCACCACATTCAATCAAATACAGAATTAAAGACAGTAACatctttcttgctttctttggGTCCAGAGACTCGCCTGAGTACATTGGTTTGAATTCAGATTAAACCGGGGAAaccttttctgttttacaaAGGCAGccatgtaaagaaaacaaaggaccCAGTTTCAGGGCTGGTATGCTACTGGAGCGGGATATAATATGCCTATAGGAAATGTGAGTGTCTATCAAATAAGAAatctacaatataaatattgtgtatagaagtaaaacacaattaatcaGGTATGTCACTCAGGgcgttatttatttaaattattttactaaatcATGGAGCAACAGTAGTAGCCTAATCATCCTGACAGAGTCGTCTATCATAGGAGAtgagaagaaaatgcaaatgagaaAGTTCATCAATGCTGCAGTGCaaaggagagggggtggggggacttCACTGTATTCAGATGTTTATCTAATATGATCCACAGTTCAGCTGCTTCTGGTAAATTGTGTCACTCTTCATCTCAGAGTTTGATAATTCCATACAGGATGACCCCtctttgcactgtactgtgggAGAGGAATGAAAACACCCTGCATGgcattaataaata

Function

NR:

description
PREDICTED: guanine nucleotide-binding protein G(T) subunit gamma-T1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108205 True 1755 lncRNA 0.40 3 20699214 20702457

Neighbor

gene id symbol gene type direction distance location
AMCG00021528 vps50 coding upstream 109918 20577693 ~ 20589296 (+)
AMCG00021529 NA coding upstream 135588 20554493 ~ 20563626 (+)
AMCG00021530 vps50 coding upstream 148284 20532168 ~ 20550930 (+)
AMCG00021527 vps50 coding upstream 174888 20506025 ~ 20524326 (+)
AMCG00021526 NA coding upstream 206040 20481211 ~ 20493174 (+)
AMCG00021532 LOC103394147,LOC106952338,LOC107383304,LOC107085850 coding downstream 647 20703104 ~ 20721264 (+)
AMCG00021535 NA coding downstream 32257 20734714 ~ 20782173 (+)
AMCG00021537 col1a2,LOC107722140,LOC107667770,LOC107591591,LOC107731699 coding downstream 95241 20797698 ~ 20827291 (+)
AMCG00021536 NA coding downstream 127396 20829853 ~ 20842424 (+)
AMCG00021541 ppp1r9a,LOC107722146 coding downstream 172666 20875123 ~ 20886781 (+)
G86687 NA non-coding upstream 78493 20620506 ~ 20620721 (+)
G86685 NA non-coding upstream 84849 20612626 ~ 20614365 (+)
G86668 NA non-coding upstream 151804 20508508 ~ 20547410 (+)
G86665 NA non-coding upstream 197911 20500786 ~ 20501303 (+)
G86633 NA non-coding upstream 236223 20462255 ~ 20462991 (+)
G86727 NA non-coding downstream 198570 20901027 ~ 20902855 (+)
G86800 NA non-coding downstream 332645 21035102 ~ 21038425 (+)
G86833 LOC107754811,LOC107672863,LOC107731557 non-coding downstream 469633 21172090 ~ 21175659 (+)
G86859 NA non-coding downstream 534644 21237101 ~ 21238163 (+)
G86884 NA non-coding downstream 593074 21295531 ~ 21297780 (+)
G86688 NA other upstream 31287 20667470 ~ 20667927 (+)
G86601 NA other upstream 297965 20342610 ~ 20401249 (+)
G86616 NA other upstream 318790 20378423 ~ 20380424 (+)
AMCG00021517 gatad1 other upstream 327678 20368153 ~ 20371536 (+)
G86407 NA other upstream 1197972 19499800 ~ 19501242 (+)
AMCG00021539 pdk4,LOC107722149 other downstream 206360 20908817 ~ 20912002 (+)
AMCG00021550 NA other downstream 395962 21098419 ~ 21109368 (+)
AMCG00021551 NA other downstream 456167 21158624 ~ 21165500 (+)
AMCG00021561 LOC106582151,LOC105891776,LOC106605261 other downstream 527395 21229852 ~ 21232853 (+)
G86861 mios,LOC106605261,LOC106582151 other downstream 532613 21235070 ~ 21236080 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_005082 gngt2b coding NC_007123.7 CM002896.2 3249054 ~ 3252263 (-)