G86727


Basic Information

Item Value
gene id G86727
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 20901027 ~ 20902855 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU108243
CCCGTCTCGTCGATGTAAACGCTGATTCCATGTGGATTGAACGAATCCAGATCGAACCCGCGGCTCACCCTCAGCTCGACTGGTTTGAGATGATTCGCGTGCAGGTCCAGAACATAGATCTTCCCAGGTTCCTCGGAAAAGTGGGGGGTACCAGGATACTTCAACCCctagattaaaacaacaaacaccagTCCTTTATTTCACTATGAAAGGgttagtttaattaaatcagtCCAGTTGTGTGGGCAGGGCATCTGTGACACCACACTGCCCCGTCATTACTGAACCTGTAAAGTGTAAAAGGCCTCTTGTGGAGGGTGGGGGATAAAAGTGGAAGAatggaaatgtgtaaaatgaCCAAATAGATTCTTAAATCAAGGTCTCAAAGATGGCTTTAAGGATAACAAAACCTTCAATCAAATGCAAAGGACTCAGATCGTAATGGCCTTCAGCAGACAGTACATTCCCTCAGCAACACAGCTGGACTGAGATGGACATCACATCTTTGGCAGCTCTGTGTTCTTGACCAGTGATTTTTCATTTCGCTCTAGTTACATTGAGCACTGTCAATCCACACTGGGATGGAGAAACGTAGCCATTTTTTCTTTGCATCAGCTACATCTGAAGCTGTTGCGTAGGGCACAAACAGAAATGCACCAACAAGAGTCACACAACACAAGATGTGCCTTTGAACGGCCACTGAGAGTCTGAGAACCCCGCCGCTTACCGTGCTGATCAGAGCCAGGCCATTGGGCAGCACGGTGATGTCTTCAGATCCGTAATCTGAgcacagagaagagaaaactatgtataaatatgtttcaCATTACAAAAATAGCAAGACCTACAAGAGGAGACTGTATGAGCATCTCGTCTCAAGACTAAGAGTGGGTAGCTTATACAGAAATTAATCTCATCGTGGTTAATACACAAGGCCTCAGCATTGCTTGGCACCTGATGTCTTAAAGTGAGAAACAAATCAGTACACGGCAAAGTACACAAACAACACTGCCAATGACACTAATgcaaaaatgtgtgtgtctggattCCTAGCGTAGTGATAGGTCTTTACACTGAGGGATACGATGGATTAAAAGTCATTCTTACCAAGACCTTTAATGAGCTCACAGTTGGGAAGATGATTTTGTTGGATTTCTCTGGAAGCCAATAACCTTTTCCTAAATGCACGAATCTCTCTCCAAACAGCGCTAACAGCCCTGCGGCCACCGCGACCAGCACTGCGAGCCTCCCCATGGTGCGTGTCCCGTCTGTCCTGCGGAGCTTCTCCCTCCAGCACCTTTAACCGCAGGCGGCAGtgcccgcagttctgcgcggctccaccaatgggatcggggGATTCTGCAGTtgtgcgcagaactgcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108243 True 1382 lncRNA 0.47 2 20901027 20902855

Neighbor

gene id symbol gene type direction distance location
AMCG00021540 NA coding upstream 2579 20890890 ~ 20898448 (+)
AMCG00021541 ppp1r9a,LOC107722146 coding upstream 14246 20875123 ~ 20886781 (+)
AMCG00021536 NA coding upstream 58603 20829853 ~ 20842424 (+)
AMCG00021537 col1a2,LOC107722140,LOC107667770,LOC107591591,LOC107731699 coding upstream 73736 20797698 ~ 20827291 (+)
AMCG00021535 NA coding upstream 118854 20734714 ~ 20782173 (+)
AMCG00021542 NA coding downstream 1533 20904388 ~ 20907786 (+)
AMCG00021544 dync1i1,LOC102799504 coding downstream 26949 20929804 ~ 20940208 (+)
AMCG00021543 dync1i1 coding downstream 54374 20957229 ~ 20980625 (+)
AMCG00021547 dlx6,LOC107670195,LOC107665661 coding downstream 175090 21077945 ~ 21080685 (+)
AMCG00021555 NA coding downstream 277947 21180802 ~ 21192757 (+)
G86695 LOC103362787 non-coding upstream 198570 20699214 ~ 20702457 (+)
G86687 NA non-coding upstream 280306 20620506 ~ 20620721 (+)
G86685 NA non-coding upstream 286662 20612626 ~ 20614365 (+)
G86668 NA non-coding upstream 353617 20508508 ~ 20547410 (+)
G86665 NA non-coding upstream 399724 20500786 ~ 20501303 (+)
G86800 NA non-coding downstream 132247 21035102 ~ 21038425 (+)
G86833 LOC107754811,LOC107672863,LOC107731557 non-coding downstream 269235 21172090 ~ 21175659 (+)
G86859 NA non-coding downstream 334246 21237101 ~ 21238163 (+)
G86884 NA non-coding downstream 392676 21295531 ~ 21297780 (+)
G86892 NA non-coding downstream 613178 21516033 ~ 21516243 (+)
G86688 NA other upstream 233100 20667470 ~ 20667927 (+)
G86601 NA other upstream 499778 20342610 ~ 20401249 (+)
G86616 NA other upstream 520603 20378423 ~ 20380424 (+)
AMCG00021517 gatad1 other upstream 529491 20368153 ~ 20371536 (+)
G86407 NA other upstream 1399785 19499800 ~ 19501242 (+)
AMCG00021539 pdk4,LOC107722149 other downstream 5962 20908817 ~ 20912002 (+)
AMCG00021550 NA other downstream 195564 21098419 ~ 21109368 (+)
AMCG00021551 NA other downstream 255769 21158624 ~ 21165500 (+)
AMCG00021561 LOC106582151,LOC105891776,LOC106605261 other downstream 326997 21229852 ~ 21232853 (+)
G86861 mios,LOC106605261,LOC106582151 other downstream 332215 21235070 ~ 21236080 (+)

Expression


Co-expression Network