G86740


Basic Information

Item Value
gene id G86740
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 20828259 ~ 20830922 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU108260
GGGTAAGTCATCTACACAAGATCCTCTGGCTTCATATTTCTGAAATGAACTTCCTGCGTGCTTTACAGCAACACTACGTCACTCTTCTGGAGTGGTCTGACCAGTTTGACTAGTAAAAGCCACAACTAGCAAGAATTGGCATAATCCCTACCAGGGTGTCAGCAAGCAATTGTTGTGGTTGGTGCCATGAAATAAATGCACCATACAtagtggaaaataataataacagtaattataacaacaacaataatagcgTCCTTGGTCATCGTATTGCCATTGCTGATTGGATTCGGTATTAAAAACAATGGAGATCCAGTTTTAGAGCGGATCAGTGGTCTGCAGCCACACGGCACTAACTAGCTGAACGTTGCTACACACCTGCAACACTACAGTTACAAGACCATCGCGACACCTTTACACTAAACCCATCTGGGCTCGCGTGTTGATGCGATAAACGCAACGAGGGAGCGGAGGCAGCCCAGCGTGCAGGAACAAAGGGCAGCATCACtgccacacacacgcaccagCCTCTCCGTGCAGTGCGCTGCGGGGCTGCTCTGAACGCCTGTGCCGCGTTTGGGCCGCAGTCGCGCGCTGCGAGGTGACAGCTCGCGCCCCGGGGAGCCCCTGCACGGGACCGGCGCGAGGCAGGACAGGACCGCGCCGAGGGAAGGCTGGCTGTCAGCTcaaccgcaccgcaccgcaccgcCCAGCCTTACCTCCATAGTGCCGAGAGAGCGAGTGCAACACGGCTATAGGCCAGGACCGCCATCTTGGCTCCTCCATGACAACACGCAGACAGACGGGACGCAGCGAAGGGGCTGAACCAGGAGCGCACGTCGGGGCTCAGGCGTCCCCCTGCCGGCGGCTCCGGGGCGGGCTGCCCGCTCTGCCCGCTCTGCCCGCTCTGCCCCTCTAGCGCCGCGGCTTCCTCACCCGGCGGAGTGGCGGGGCGGCGGGCGTCTGTCATCGCGGGGTTGTGGTAGCAAAAAGTAGGACGTGTCCGTGTGCGTGTGAAGTTTGCTGCAGCAAATGCGACAGCAACTCAAAGTAATAAAGCAGCATCAATAAAAAAGCATGCCAAGATCAACACGGGCTGTCCTATGCAAGTGGAGTTTGAGTTTCCTGCTTCCTTATCTCTGCGCCAAGGACGTGCTCTGGTTAGGAGTTGTCAGTAGCAAACAGGTTGATCATCGTAAtgaaactgaagtgcagaaCAGGCTCGGCACTGCGGCCCTTCAGTTACTGCTGGactacatttttgtttgacaCTGTAATAGCCGCCAATCACACGCCGTCTTTTGTCTCTTGTACTATGCAAATATGTAATATTCAGGTGGAGACAATGTCACTATGCAGTTCTAGCACTTCTTTACCCATATATATAATCAGTCTAATGACTTTCTACCTCAAACCCACCTTTGTGCAAAAGACCAAGCTGGCTGCTCTGTGTTGATGCCTGTGCCTTAACTACTTCTCCATTTGTTCAGAAGTGGGTTTTAACACTGAGACCAGTTGCCCCATCTATGCCCGCAGGCTGGCCATTTCCATATCACATCAACTATATAAATATCATGAATTACAATAACATAACCAGCCTATGTTTCTCTCAAATCCAAATAATACAGTTACACAATAGCCCGTATCCCTACGAAGGGAAATGATAAACCTACTTCAAATATTGCAATGAAAGCTGAACATGAAAGTACAACAGACTGGTACCctctgttaataataataatattattttcaaaagacaaTAACAATAAGGTGATAACTTGATTGAACTGCACGCAGTTATCATCTTTATCCACAAGATGGCAGCAGAACAACACGGCACAGTCGCTGCGGCAGGTCTGCTCATCCCCACAGTATTGAGAACAGTCAGTTGCCCGTTATAGTTTATTGTCTGAGATGGTACATGTATTGTTCATACAGCGCAGACTCATTAATTTAGTGCACCTGATCTAACTGGCCAAGGAGGGTGAGGTGAGTGATGTGCATGAAGGAATACAgattgtgtgcgtctctgagATGCACCGAGTCTTTGAGATGAGGTTGTGCACGGCCTGGGGTGGGACCTGTTTGTGTAACTGGGTATAACTGCTTAATCTGCTAGGCTGCACTCACTGCTGAACCAAAACCAGGAGGATATGTCACAACAGCACTGGACACCCGAAACAACGTCTTTGTCTTCAGCTCCCAGAGAAGACAGCGAGAAGATGTGCAGAGACTGACAGGTTGTGCGGTGCCTACGGTGCAGCGTGGGGATTGGCTGTGTGGGGGTGTGGTGTTATTTTGTTCTGTGCGGACAGGTGACGCAGTATTGACACCGTGTTAGTCTCTTCTTTAGTAGTATACAAGCCCCCCTCAGGATGTAATGTGGCGGGTGaaggttttgtgttgtttgaggGATGGTactgacccaaaacacacagccaggctGAAgtaaagaaagagaaggaaagggAATAACACACTGAGCTCCCATTCTGCCCCATCTTTACCCCACTGAGATTCTGGAGTTTGATATTTAGGGAAAGTTTGGCAATAAATGATTAACA

Function

GO:

id name namespace
GO:0005527 macrolide binding molecular_function
GO:0005528 FK506 binding molecular_function

KEGG:

id description
ko00230 Purine metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU108260 True 2564 lncRNA 0.50 3 20828259 20830922

Neighbor

gene id symbol gene type direction distance location
AMCG00021533 NA coding downstream 135035 20689347 ~ 20693224 (-)
AMCG00021531 calcr coding downstream 189303 20618070 ~ 20638956 (-)
AMCG00021525 cdk6,LOC107667775,LOC107558583,LOC107722162,LOC107567973 coding downstream 367981 20444543 ~ 20460278 (-)
AMCG00021523 cdk6,LOC106588946,LOC107567973,LOC107667775,LOC107558583 coding downstream 393208 20414530 ~ 20435051 (-)
AMCG00021524 fam133b coding downstream 415787 20402783 ~ 20412472 (-)
AMCG00021538 sgce coding upstream 12741 20843663 ~ 20855774 (-)
AMCG00021545 NA coding upstream 68149 20899071 ~ 20902765 (-)
AMCG00021546 NA coding upstream 85761 20916683 ~ 20926715 (-)
AMCG00021549 NA coding upstream 152678 20983600 ~ 21020401 (-)
AMCG00021548 NA coding upstream 203941 21034863 ~ 21038425 (-)
G86738 NA non-coding downstream 4295 20823000 ~ 20823964 (-)
G86736 NA non-coding downstream 5656 20821632 ~ 20822603 (-)
G86689 NA non-coding downstream 214151 20612663 ~ 20614108 (-)
G86648 NA non-coding downstream 434053 20393044 ~ 20394206 (-)
G86639 NA non-coding downstream 471780 20355070 ~ 20356479 (-)
G86848 NA non-coding upstream 344784 21175706 ~ 21184318 (-)
G86849 NA non-coding upstream 355846 21186768 ~ 21188838 (-)
G86850 NA non-coding upstream 358917 21189839 ~ 21190932 (-)
G86881 NA non-coding upstream 460451 21291373 ~ 21293903 (-)
G86893 NA non-coding upstream 685110 21516032 ~ 21516234 (-)
AMCG00021534 bet1,LOC107669829,LOC107722155 other downstream 103379 20721884 ~ 20724880 (-)
G86649 NA other downstream 430476 20395612 ~ 20397783 (-)
G86640 NA other downstream 468004 20358301 ~ 20360255 (-)
G86600 NA other downstream 492955 20329422 ~ 20335304 (-)
AMCG00021514 NA other downstream 543280 20281152 ~ 20284979 (-)
G86808 NA other upstream 232936 21063858 ~ 21083570 (-)
AMCG00021569 NA other upstream 835480 21666402 ~ 21671315 (-)
AMCG00021619 NA other upstream 2324265 23155187 ~ 23160991 (-)
AMCG00021630 NA other upstream 2498403 23329325 ~ 23332968 (-)
G87263 NA other upstream 2507329 23338251 ~ 23338484 (-)

Expression


Co-expression Network