G86808


Basic Information

Item Value
gene id G86808
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 21063858 ~ 21083570 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU108350
TGGCAATATAAGAGGTGCCGGGGTGTGCAAACAATTTCACACCTGGATGTGTTCACTCAACCAAGAgtgggatagagagagagaagtgcgTCCAGGCACTGTAAAATGGGCTTTTCTGCTCAATGCAACTTGTTTAAAAAGATACCGAGCTCAGAGAGGAAGGGGGTTGCAGCTGGAGGCTTTGTGTGCATCGATCCTGGGGCGCTTGGCATTCAGAGTctcacagggagagagaaaagagaaaattgtCAATACTGCCATAAATGTGGGAGAAAATGACAAGATTGGCTGGACATGAGGCAGCAAAACCCTACCAGCGGATTAGTGGCCTATAGATAGAAGAACGGCTAGGATGGCTGCACTGAAAGATGGTCAGAGAAATGGCTTTCAGAGCGAGCAGAGCCATCCTGGTGCTATTAGACTTGTTGCTAATAATAGGTGTTCCAGCGCCGGGAAGATCAATCAAGGCGAATCACAGGGAATGTTCCGAGGAACAGATTTACACATCTGCCCAGATGGATCAAATTACACTTGTCTGTTTTTAGTTGCATTACTTAGAAATTGGTTGTctacttttttttcatttatgtgtCAATGGGCCGCTAAAAGGATTTCGCCAGTAAATCTcctgtcatctctctctctctctctctctctctctctctctctctctctctctctctctccccctcttcctctctccctctctgactgtaatggatttattttgattgcaaACTTGCTTATGCACAGACAAATAATATCAGGTACCAGTGAGAGTTCACACCTTTGATGCGGGTCCAGATCGGATCTCTTGGAATGCTGTATTTCAGTTGTGTCTGAGGTGTATTGCTtcctttaacattattttacagtatgtgATAGATTTCCTCTGATGCATTACACAGATTATTACAATGCCCATAAAAACCTGTTTCAGCAAACGTGCACGACTAGGCATCAAGGCGATTCCATGAATGGGTGAACATCAATGCCAGAATTACAAAATCACTAATTGCCTTGGTAAGTGGGCTATTATGGCGCTCTAATAAATCAGATTTCAGGATCCGCCATCAGTTTCATGCGATGGACTGAGGAGAATCTGGGGCAGAAGTGATTTTGTCAGGCGaaagttgtgttgttttaattttgaggGCCATCAGAGAGAAGCagtaacattttctgaaactttttttGTCAAGTCATGTCCTCTGGTTGGTTCTACATTGGGGGGATAACCCCAATTATGACTGGTTTTGAATATTGCTTCAACATTCAAGGTGTTATTAATCTGTGCAATTGCTTTGTATTGTTCTTAAGAAAGACTGACAGGATTTCATGATAGAGTATTTTCCATGtcttaaaatatacagatttcttatttttttaaataatctactgtattgtgtatgtgtatttctaTGGGAGTCATCAACATGGGAGCTGACCTCTAACTTGGTGTGATATATTACTGTGCAACCTGGAAATCCTTACTAAGACAGTTTTGGTATCTAGAAGGATAGAGGTTACTTCccaatattgtttttacaaagtctgtttgtggatttGTGAACTAATCAAGATAAAATAAAGGCTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108350 True 1598 TUCP 0.41 3 21063858 21083570

Neighbor

gene id symbol gene type direction distance location
AMCG00021548 NA coding downstream 25433 21034863 ~ 21038425 (-)
AMCG00021549 NA coding downstream 43457 20983600 ~ 21020401 (-)
AMCG00021546 NA coding downstream 137143 20916683 ~ 20926715 (-)
AMCG00021545 NA coding downstream 161093 20899071 ~ 20902765 (-)
AMCG00021538 sgce coding downstream 208084 20843663 ~ 20855774 (-)
AMCG00021552 dlx5,LOC106570474 coding upstream 3305 21086875 ~ 21094522 (-)
AMCG00021553 NA coding upstream 26184 21109754 ~ 21140683 (-)
AMCG00021554 asns,LOC107568288 coding upstream 83011 21166581 ~ 21175350 (-)
AMCG00021557 NA coding upstream 112025 21195595 ~ 21205945 (-)
AMCG00021562 NA coding upstream 124126 21207696 ~ 21227807 (-)
G86739 col1a2,LOC106570460 non-coding downstream 209564 20824022 ~ 20854294 (-)
G86740 NA non-coding downstream 232936 20828259 ~ 20830922 (-)
G86738 NA non-coding downstream 239894 20823000 ~ 20823964 (-)
G86736 NA non-coding downstream 241255 20821632 ~ 20822603 (-)
G86689 NA non-coding downstream 449750 20612663 ~ 20614108 (-)
G86848 NA non-coding upstream 92136 21175706 ~ 21184318 (-)
G86849 NA non-coding upstream 103198 21186768 ~ 21188838 (-)
G86850 NA non-coding upstream 106269 21189839 ~ 21190932 (-)
G86881 NA non-coding upstream 207803 21291373 ~ 21293903 (-)
G86893 NA non-coding upstream 432462 21516032 ~ 21516234 (-)
AMCG00021534 bet1,LOC107669829,LOC107722155 other downstream 338978 20721884 ~ 20724880 (-)
G86649 NA other downstream 666075 20395612 ~ 20397783 (-)
G86640 NA other downstream 703603 20358301 ~ 20360255 (-)
G86600 NA other downstream 728554 20329422 ~ 20335304 (-)
AMCG00021514 NA other downstream 778879 20281152 ~ 20284979 (-)
AMCG00021569 NA other upstream 582832 21666402 ~ 21671315 (-)
AMCG00021619 NA other upstream 2071617 23155187 ~ 23160991 (-)
AMCG00021630 NA other upstream 2245755 23329325 ~ 23332968 (-)
G87263 NA other upstream 2254681 23338251 ~ 23338484 (-)
AMCG00021634 NA other upstream 2411455 23495025 ~ 23498761 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location