G87263


Basic Information

Item Value
gene id G87263
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 23338251 ~ 23338484 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU108932
TGAAAATATGCAGGAAGAACTCCGAAGCATTGATATGGAAAACATTAAAGATATCGTGCCGACCATTACCAACAAAATACGCCTTCCCTTCATCCAGAAACTCTCCCACTCTGTCACCAATTTACCGCTCAGGTTTGGCAGAGCCCCTCAGCCTGTTGCCAACCTGCCCCTGAGGTTTGGTAGAGCCATGCCCGAGGGGGTAGTGAGGATGCCCAAGGCTGCCCTGAGTCTGCC

Function

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003690 double-stranded DNA binding molecular_function
GO:0000976 transcription regulatory region sequence-specific DNA binding molecular_function
GO:0001067 regulatory region nucleic acid binding molecular_function
GO:1990837 sequence-specific double-stranded DNA binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108932 True 234 TUCP 0.52 1 23338251 23338484

Neighbor

gene id symbol gene type direction distance location
AMCG00021629 NA coding downstream 34505 23265750 ~ 23303746 (-)
AMCG00021627 NA coding downstream 76071 23254939 ~ 23262180 (-)
AMCG00021621 tra2a,LOC107688335 coding downstream 185930 23145357 ~ 23152321 (-)
AMCG00021622 NA coding downstream 210774 23127220 ~ 23127477 (-)
AMCG00021620 igf2bp3,LOC108273237 coding downstream 228500 23096480 ~ 23109751 (-)
AMCG00021637 NA coding upstream 328109 23666593 ~ 23667210 (-)
AMCG00021635 hoxa2aa,hoxa2,hoxa2b,LOC107685611,LOC107684556 coding upstream 332941 23671425 ~ 23673576 (-)
AMCG00021636 NA coding upstream 339347 23677831 ~ 23685846 (-)
AMCG00021639 NA coding upstream 359160 23697644 ~ 23698829 (-)
AMCG00021641 NA coding upstream 370717 23709201 ~ 23710134 (-)
G87234 NA non-coding downstream 140408 23197581 ~ 23197843 (-)
G87218 NA non-coding downstream 232063 23093588 ~ 23106188 (-)
G87203 NA non-coding downstream 247140 23089602 ~ 23091111 (-)
G87193 NA non-coding downstream 262236 23075634 ~ 23076015 (-)
G87181 NA non-coding downstream 323469 23007394 ~ 23014782 (-)
G87269 NA non-coding upstream 32706 23371190 ~ 23372192 (-)
G87282 NA non-coding upstream 94732 23433216 ~ 23481900 (-)
G87287 cbx3,LOC108425284,LOC105023664 non-coding upstream 144488 23482972 ~ 23488212 (-)
G87427 NA non-coding upstream 738415 24076899 ~ 24077107 (-)
G87428 LOC103376870 non-coding upstream 742252 24080736 ~ 24133311 (-)
AMCG00021630 NA other downstream 5283 23329325 ~ 23332968 (-)
AMCG00021619 NA other downstream 177260 23155187 ~ 23160991 (-)
AMCG00021569 NA other downstream 1666936 21666402 ~ 21671315 (-)
G86808 NA other downstream 2254681 21063858 ~ 21083570 (-)
AMCG00021534 bet1,LOC107669829,LOC107722155 other downstream 2613371 20721884 ~ 20724880 (-)
AMCG00021634 NA other upstream 156541 23495025 ~ 23498761 (-)
AMCG00021662 NA other upstream 861052 24199536 ~ 24210205 (-)
AMCG00021668 NA other upstream 1004416 24342900 ~ 24363459 (-)
G87674 NA other upstream 2065166 25403650 ~ 25406538 (-)
G87806 NA other upstream 2566960 25905444 ~ 25908005 (-)

Expression


Co-expression Network