G87321


Basic Information

Item Value
gene id G87321
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 23687325 ~ 23692148 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU109000
ctgttgttatttttaatcaggGAACAGAAGAATATTTGATATTATAATTAGACTACTGAAGATTAAAGAACTGCACAATCCCGTTCCCAAATGGGGAGATAGCTGTAGGCTTTGAAAGTCTCGTTagtattttctaaaatacaatctgagaaaatatatattgcagcatgcagatatatagatattgtTATGGTTATAGATATAGATGGCTATGCATCTGCCATTTTTTCTGAAACCCCTAAGCCTTTTCCACTGACCTTTGCCTTGAACAGCAATAACTCACCCCAGTAATGAACAATCAACGGAAATAcctcaaaataaaatccatccTCTTAAAGCAGGGGCTCCTTTTCTCTCCGGTCCGAGAAACATATCCATCCGTGAGAGCAGAAACCGACATCCAGAAACGAGCCCTTTCCCAGTAAAGTATATAAAGCCCTGACTCTTAGCAGAAAGTGGAAACGCGCAATCCCAGCCCAAGACAGCCCGGGTCTCCGCTCCAAATGGCACAATAATGCGCCGGATTACGCGCTCACGTGGTGCTACGTCAACTTAAAgccttttatttgaatttggGAATCATTAAAGGAACTATTCATTGCCAGCTTAATCTTTtactgaaaaaaagaaagttaaggCACAAAACAGAATTGCATATATTTTAGCACAGGAGATGAGCCTGCATGTTacgtttgattgtttttccccaACAAAATATAATCCATTTGAAGGAGTCTTTCACCAACTTTGATGAAGCTGCACTTGCAAACACGGAATTGGAGCTGAACGTCGAAGATGATCTTTGCACCGAATCACCTGGAAGTTCATTGAAATCTGGGGAATGTGTACATGTATGCATTTGCCTtaatttcttcttctcttcGCTGATATATGTGTGCATCCTCCCCTAGCTATCAGTGAGACCTGGAGAATGTCTTGGACCTTCAAATGCCACCGCAATCGTGGATGGATAGCAGACTCGCCCTCCCTCCGGAGTGAAGGTTTTTCTTAACCTGAGGATTTTTCTGACGTCTGAGACACACATGGGTTGCAAATCGATATGATAGGAGAAAGACGATAACAGGAATGAAGAACGGCTGCacacaaatgctacatttggTGGGAATACGTGTGCGTGGTTTATTTGGATGTTTCAACAGCCTTTCTGTCGTTGTTTCATTTTCCCCCTGCCCTCTGTAACCCGAATTAATCGATAACCGTATATTCCACTCATCGAGTCCTGTATGCAGCAGTAATTGCCTATACAGTACCATCCCTGGACCCTTGCCAAACGGTAATACATATCTTCACACAATGTTGACATTTAGAGCTGTAACGTAAAAGCTAAGGTTACCGATTCAGTCAGCTGCAAATATGGCTCTTTCGCCTGCCTTTCGCCTTCTGGGTTTCAGGTCGCAGACGTCAAGGCTATGAAGTAGGCTTGGACAGGATATAGCGCCCACGCTTTCCCTGTGAGGGTCTGCTGTAGGGTGCAGGTTTTGGTCACTTCTACAAATTTATCAATTAAGGCTTTTGACTAATGACAAAAGCATGGGATTTTACACTGCTTTCCACAAAATACGGACATAGATCAATTTGCATTATTAGCATCGCCGTTTTATACATCTGATCTgatagaaatatgttttttttttaataattaatcattcagcttgttttttattttatttgtgggtGTATGGTAAACTCACaggtaaatgtaaatatgtattaaatcaaaacgcTAGAAGCGTACAAAAACTAGTATATTAGAGGATTTTTCCAAATAAGATGATCACTCGctataaacaaatcaaataaccTATAACTGACTTTCCTGAAGCAAAGGACACTCAGTGGGTTTAAGTCGTGGATTTTAAAGTCCGTTGTCCTATAATTTCCCTAAATATCTTTGGTTCAGAACAGGCTGTGTTAAGTTTCAAATGCTCGGGAGTTCATCATAACCTTCTTCTTCTGAGATGTAAAGGGAAAGGAAGAGCATCACAAAAGTGTCAATAATGTCAAACCTTTTCAAAGCGAAATACTACAATTTGAGTTGTTTTCTTATGAGATTAAATGctgaatatttatattgttttaatgcacaaaACAACTTTGGATTGATTTAAACTTTGCAAACCAATGTAAGGATGCTTTTTaatcagttaatttaattaaaaacatgacgCAGCGATTCATTTGCTTTAAAAGGGACTTAAGGGTCGACTTTGGGAAAACCTATgagattttatttcttctacACATTttagtataaaaacaataaataagatccatttatataacttatatattatatatccgAGACTGTCAGTTTTTTCTCACGATACTCACGGGGAAAATGCAATTCTGCgttctttatttaatgcaaagagagaaagaaacttAACATCTATATAGAAAACCCTGTAAATTTTTAACAAATGCAAGAGACGTTTCTTTTGTTATTCAGTTCATCAAGTCCCACCGACTTGTGGATGTGCTAACCGCTGTTAGTCTCCACAAAGAAATTCACACGGCTGGAGCGGGAGATATCTTGCACATTGTCAATTATTTATCTGATTTCTTAATAAACTTTTAAACTGTTGAATACTGGGAAAAATACGcgattttaaaaaacagtagAAAATTCGTTAGATACAAGGTCTTGACTTTCTCTTGCGTGTGcctctgtatatttatttatattacagcaCAGAATCGATTTATTTCAGATCAATATTCGTTGGAAGAACAGCGAAGAATGTGTATAGGTTgactattaatgtatttattttaaaacgaGCATTGCAAATTTCCATTGTTTTAATAGTGGATTATTTCATGTAATATATTAAAGGACGTGTGATTCTGTTTAACCTATTCTTATACTggtatttaatgtatacatttttacaaaaaaaaaaaaaaaaaacatttaaacagggACATTTTTGtcataataaagaaacaaacaaaaaagaaacacccTGCTTTTGAAAAACGTCGTTTTCTGTGTGATTTGTAGACTTTAATCTCAGAAATATTGTCATGGTTGAATGTCATTTGTGCAGTTTTGacctattattttaattctctaCTCAcaattgtggtttgttttagtattaACTTTTGTGTTTCCACAACGCTTTCGGTAtctctgttttatttacatgtaaCTATCTCTCAGTCTTTATTACTTCCGATCTTCcgatattttgttttcaattttcattATGATATAGATACTGCCACGGACaataactgtaaaatacatgtttccCATTTGAATGTATGTGTCTTCGTGCTGGACACATAATCTGACGTTATTATTGGACTCTACCCAatgtcaaaatattttgtagcaGAGCGTAAACGTAGTCAATTCACTTTCTTTCACTTGTACAATATTGATGTTTatacaggaaataaaacaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU109000 True 3436 lncRNA 0.36 2 23687325 23692148

Neighbor

gene id symbol gene type direction distance location
AMCG00021631 NA coding upstream 173587 23506699 ~ 23513738 (+)
AMCG00021632 NA coding upstream 199117 23482955 ~ 23488208 (+)
AMCG00021633 NA coding upstream 206773 23470032 ~ 23480552 (+)
AMCG00021628 LOC103364058,LOC106950171,LOC107743218 coding upstream 318005 23343890 ~ 23369320 (+)
AMCG00021625 mpp6,LOC106570530,LOC106588853 coding upstream 434119 23213371 ~ 23253206 (+)
AMCG00021638 NA coding downstream 87622 23779770 ~ 23782827 (+)
AMCG00021645 NA coding downstream 161771 23853919 ~ 23883152 (+)
AMCG00021648 creb5,LOC107550799 coding downstream 263781 23955929 ~ 23974179 (+)
AMCG00021651 LOC106537063,LOC106517749 coding downstream 328717 24020865 ~ 24029573 (+)
AMCG00021655 chn2,LOC107685541,LOC107745376,LOC107550834,LOC107596649 coding downstream 436851 24128999 ~ 24135047 (+)
G87313 hoxa3 non-coding upstream 8722 23673892 ~ 23678603 (+)
G87288 NA non-coding upstream 102989 23489081 ~ 23584336 (+)
G87233 NA non-coding upstream 489456 23197621 ~ 23197869 (+)
G87215 NA non-coding upstream 495572 23145004 ~ 23191753 (+)
G87168 NA non-coding upstream 672494 23007394 ~ 23014831 (+)
G87402 NA non-coding downstream 337696 24029844 ~ 24032117 (+)
G87423 LOC103376870 non-coding downstream 388588 24080736 ~ 24139508 (+)
G87464 fkbp14,LOC107685615,LOC107596753,LOC107743226,LOC107550815 non-coding downstream 524226 24216374 ~ 24218824 (+)
G87482 NA non-coding downstream 568814 24260962 ~ 24261617 (+)
G87525 NA non-coding downstream 667356 24359504 ~ 24360909 (+)
AMCG00021602 NA other upstream 976181 22697164 ~ 22711144 (+)
AMCG00021591 NA other upstream 1396184 22270871 ~ 22291141 (+)
AMCG00021560 NA other upstream 2430136 21241666 ~ 21257189 (+)
G86861 mios,LOC106605261,LOC106582151 other upstream 2451245 21235070 ~ 21236080 (+)
AMCG00021561 LOC106582151,LOC105891776,LOC106605261 other upstream 2454472 21229852 ~ 21232853 (+)
AMCG00021656 NA other downstream 482255 24174403 ~ 24178092 (+)
AMCG00021657 NA other downstream 491060 24183208 ~ 24198827 (+)
AMCG00021676 kcnh8,LOC106570508,LOC106941718 other downstream 1217736 24909884 ~ 24949100 (+)
AMCG00021682 NA other downstream 1584628 25276776 ~ 25372339 (+)
AMCG00021692 NA other downstream 2060209 25752357 ~ 25753253 (+)

Expression


Co-expression Network