Gene
RNA
| Item | Value |
|---|---|
| gene id | G87427 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030130.1 |
| NCBI id | CM030130.1 |
| chromosome length | 39556810 |
| location | 24076899 ~ 24077107 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0060034 | notochord cell differentiation | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU109118 | True | 209 | lncRNA | 0.57 | 1 | 24076899 | 24077107 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00021652 | LOC107743225,LOC107550833,LOC107743199 | coding | downstream | 2927 | 24056803 ~ 24073972 (-) |
| AMCG00021653 | NA | coding | downstream | 22027 | 24052590 ~ 24054872 (-) |
| AMCG00021650 | NA | coding | downstream | 134284 | 23934484 ~ 23942615 (-) |
| AMCG00021649 | jazf1,LOC108242006,LOC108441515,LOC107550831,LOC572950 | coding | downstream | 184253 | 23885292 ~ 23892646 (-) |
| AMCG00021646 | hibadh,LOC101062690,LOC106570522,LOC108441516 | coding | downstream | 228408 | 23844671 ~ 23848491 (-) |
| AMCG00021660 | fkbp14,LOC106943903 | coding | upstream | 138761 | 24215868 ~ 24220678 (-) |
| AMCG00021661 | NA | coding | upstream | 160168 | 24237275 ~ 24256623 (-) |
| AMCG00021663 | NA | coding | upstream | 184794 | 24261901 ~ 24277596 (-) |
| AMCG00021666 | ankrd28 | coding | upstream | 202485 | 24279592 ~ 24307071 (-) |
| AMCG00021667 | NA | coding | upstream | 289618 | 24366725 ~ 24369123 (-) |
| G87287 | cbx3,LOC108425284,LOC105023664 | non-coding | downstream | 588687 | 23482972 ~ 23488212 (-) |
| G87282 | NA | non-coding | downstream | 594999 | 23433216 ~ 23481900 (-) |
| G87269 | NA | non-coding | downstream | 704707 | 23371190 ~ 23372192 (-) |
| G87234 | NA | non-coding | downstream | 879056 | 23197581 ~ 23197843 (-) |
| G87218 | NA | non-coding | downstream | 970711 | 23093588 ~ 23106188 (-) |
| G87428 | LOC103376870 | non-coding | upstream | 3629 | 24080736 ~ 24133311 (-) |
| G87495 | NA | non-coding | upstream | 201530 | 24278637 ~ 24279387 (-) |
| G87573 | NA | non-coding | upstream | 468975 | 24546082 ~ 24548123 (-) |
| G87627 | NA | non-coding | upstream | 910335 | 24987442 ~ 24989739 (-) |
| G87622 | NA | non-coding | upstream | 911294 | 24988401 ~ 24994242 (-) |
| AMCG00021634 | NA | other | downstream | 578138 | 23495025 ~ 23498761 (-) |
| G87263 | NA | other | downstream | 738415 | 23338251 ~ 23338484 (-) |
| AMCG00021630 | NA | other | downstream | 743931 | 23329325 ~ 23332968 (-) |
| AMCG00021619 | NA | other | downstream | 915908 | 23155187 ~ 23160991 (-) |
| AMCG00021569 | NA | other | downstream | 2405584 | 21666402 ~ 21671315 (-) |
| AMCG00021662 | NA | other | upstream | 122429 | 24199536 ~ 24210205 (-) |
| AMCG00021668 | NA | other | upstream | 265793 | 24342900 ~ 24363459 (-) |
| G87674 | NA | other | upstream | 1326543 | 25403650 ~ 25406538 (-) |
| G87806 | NA | other | upstream | 1828337 | 25905444 ~ 25908005 (-) |
| AMCG00021700 | NA | other | upstream | 2014120 | 26091227 ~ 26105391 (-) |
