G87674


Basic Information

Item Value
gene id G87674
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 25403650 ~ 25406538 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU109433
atgtgtCAACAAGAGACTTTATTGAAGGATCacattgaaaactgaaattctgccaaggggaaaaaacatgctAATTGTACCTTTTACAAGCAGTCAATATGTAAAATGtcttttgtaattaattatatagcACAAAAAAGAACAGCTAATATTGGAAAAAGAAACTAACCATTTACTTAAAAGATGCttattgccttttcttttttctatctGTACCAAGATAACTTACAacagcaaaaaaggaaaaaaaaacaaaaaaacaaaaaaaaacagaacgaaaacaaaactgaaataaaagacTGAATAAAATCTGCATTAGAAATACCCATCACGATCCTCATTACACCCCgcccctgcccccaccccctgcccaaAACCTATTCATAAGCAGCTCTTTCCATCACAGACAAGTTACACGGGAACAGACATCTCTGAATTATGTGGCATATCTCTTTGTCCACTGTCTGGCTATTCTGTCATGCTCGGCTCTGTTGGTCATGTATTGAGTTGCAATGCTTCCAACGAGTGGATCAGCtgtgaagaacaaaaacacagaaacagcacAGGGCTGGGTTAGGCAAGTCCTGCGCTAGGgtgaatgaaaacaatttaatgaaACACCATGCTGACACAAGCCTAACTCCCATGCGGCTACATGGAACTGAAATGTGAAGTTTTCCAAGAAAAGTCAGGCTTACACAATCTGCAGTTCCAGGTTGACTAAACACACATGACTTTCAGCTACTTTGTATGTTTTCTACATTTACTGATAACAGACAAAGGCCACCATAAGCTcacttaataaatacatacttgtAATTTGTTCCTCTGTTAATTTTACACCCaacatttgcaatgtaattgtAGACAAACGAAAATGTGGCAAGTTATACAAACGTCTTAAccactattttttatttatggctAAGACGCTTTTGAAATGTCTTAAATGCGTCACTGCAAACTTACTGAGTTTTGGTCAGATTTTACTCATTTTCATTGAGGTAATGTCATTAACAATACTCATGTACAACTGGatgggtaaaaaaaagaaaagaaaaaaagaacctAAAATCCAAAGAGGAACTCAATTTGACAGTAGCCCTTCACTGTAATTATATGCCAATAAGGGGAAAAGTTGgtcaacaaagaaaacaaataaatcattaaaatacatgtcGATAGGCCTGGAACACAACTTGTTTACTCCCCAAGGGTCAGGCTTCCCCATTCTCTCTCCGCTTCTGAAAAGAACCTACAGCAGTGGGGAACTTAATCTCCTTTCATCCACATCCAAAATGAGATTCGGCACTCAGAAATCTGGGAGGGTGCCAGCCAGTGAACACAAGAATGCTGCACCTACTCTGGGACGGGCAGACGGGCCCTCTGCTGAGGCAGCCAGCTGCGTCCTGAGCACAAACACGCGAACCTGGTCTAAATCTGCTCTGTGCAAACACACACTATCACTCTTTATTAGTGGCCATGAGGGAAATACAAATAGCAAAcggaataaacaaatcaaagaacaaAGCCTGTCTTTCTTGATCTGAGATTAATGAAACCTTGACACGTAGAATTAAACGGCTAATTtgaacagttttttattttattaaaccacCAAGCTTGATTGGTGTTTTTAGGACCTTGTCCTTACCAGGATTACAGTCTGTGAGGAGGGAGCAGATGGACAGCAGGATTACAGTCTGTGAGGAGGGAGCAGATGGACAGCAGGACCTTGGAGATGGTTAGCGCTGGGCTCCAGTTGTCCTTTAGGATATCTAGGCAGATCACCCCCTGGCTGTTGATGTTACAGTGGTAGATTCTCGTCCGGAAGGTCACCTAATAGAACCCACAGGACAGTTAAAGACGGGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU109433 True 1873 TUCP 0.40 2 25403650 25406538

Neighbor

gene id symbol gene type direction distance location
AMCG00021681 NA coding downstream 199749 25202404 ~ 25203901 (-)
AMCG00021680 LOC104951919 coding downstream 318568 25074347 ~ 25085082 (-)
AMCG00021679 NA coding downstream 390890 25007690 ~ 25012760 (-)
AMCG00021677 NA coding downstream 416690 24975268 ~ 24986960 (-)
AMCG00021675 LOC107716986 coding downstream 601317 24766785 ~ 24802333 (-)
AMCG00021686 nkiras1,LOC106588667 coding upstream 164 25406702 ~ 25411562 (-)
AMCG00021691 top2b,LOC106570304 coding upstream 276232 25682770 ~ 25704828 (-)
AMCG00021690 NA coding upstream 299038 25705576 ~ 25713766 (-)
AMCG00021696 NA coding upstream 312819 25719357 ~ 25799664 (-)
AMCG00021695 NA coding upstream 467353 25873891 ~ 25884232 (-)
G87622 NA non-coding downstream 409408 24988401 ~ 24994242 (-)
G87627 NA non-coding downstream 413911 24987442 ~ 24989739 (-)
G87573 NA non-coding downstream 855527 24546082 ~ 24548123 (-)
G87495 NA non-coding downstream 1124263 24278637 ~ 24279387 (-)
G87428 LOC103376870 non-coding downstream 1270339 24080736 ~ 24133311 (-)
G87694 rpl15 non-coding upstream 5866 25412404 ~ 25460562 (-)
G87707 NA non-coding upstream 124935 25531473 ~ 25531759 (-)
G87717 NA non-coding upstream 250844 25657382 ~ 25657793 (-)
G87719 NA non-coding upstream 270445 25676983 ~ 25677417 (-)
G87720 NA non-coding upstream 271649 25678187 ~ 25681020 (-)
AMCG00021668 NA other downstream 1040191 24342900 ~ 24363459 (-)
AMCG00021662 NA other downstream 1193445 24199536 ~ 24210205 (-)
AMCG00021634 NA other downstream 1904889 23495025 ~ 23498761 (-)
G87263 NA other downstream 2065166 23338251 ~ 23338484 (-)
AMCG00021630 NA other downstream 2070682 23329325 ~ 23332968 (-)
G87806 NA other upstream 498906 25905444 ~ 25908005 (-)
AMCG00021700 NA other upstream 684689 26091227 ~ 26105391 (-)
G87871 NA other upstream 745567 26152105 ~ 26154375 (-)
AMCG00021719 ndrg1a other upstream 1267540 26674078 ~ 26718508 (-)
AMCG00021723 hsf1 other upstream 1493425 26899963 ~ 26919844 (-)

Expression


Co-expression Network