G87765


Basic Information

Item Value
gene id G87765
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 25832454 ~ 25832988 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU109541
aaacaatgtactttTCTGAATAAATTTAAGCAAACCAGTCCAGTAAAATAGTATTCAATCGAAATACTTAATGTAATGTTAGTTTGCTCCAAGGGCCTTCATAGAAGAGTTTCATGGAAGCAGCAGATTACCTGGAATAAAACCAATTTGAAGTGATGTTGCtccaaaacaacagcagatgGAAGCAGAAGACTAGGAACGTAAAATGAATGAGAGAGACTGGGACTTTCAAAGGACTGCATGTGGATAGCAAGGGTCTACACTGGAGATGCCAAGTAACTGGTATGAAGTTTGAATTCTTTTGAAACGGATTTTGGAGTTTATATTGTCTTTATCTAAATAAGAGGATTAAGAAAGCTAACAACACTCAGCTATGCAGCAGGTTCAGTTCAACGAGATCTTGTTTAAATGTCCAGTGACTTTATTGCAAAAATGTGGCTGCCCTGATTAGTTGTCTGACAGGAGAAACCAGGGTTGCTGTTCTCATAGGGATGtaatgtgtgtgaatatatatatataggcaaatATGTCTTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU109541 True 535 lncRNA 0.37 1 25832454 25832988

Neighbor

gene id symbol gene type direction distance location
AMCG00021694 LOC108441798,LOC107698647 coding upstream 70 25803425 ~ 25832384 (+)
AMCG00021689 NA coding upstream 115868 25714584 ~ 25716586 (+)
AMCG00021687 rarb,LOC107372434,LOC107700643,LOC107717720 coding upstream 154273 25632186 ~ 25678181 (+)
AMCG00021688 NA coding upstream 217189 25592537 ~ 25615265 (+)
AMCG00021683 NA coding upstream 399847 25418820 ~ 25432607 (+)
AMCG00021697 NA coding downstream 89214 25922202 ~ 25943386 (+)
AMCG00021704 NA coding downstream 287863 26120851 ~ 26121836 (+)
AMCG00021702 LOC106588954,LOC103026965,LOC106570445,LOC102291972 coding downstream 297494 26130482 ~ 26148080 (+)
AMCG00021706 gabbr2,LOC107653854,LOC107724329,LOC107710365,LOC107670291 coding downstream 502662 26335650 ~ 26371009 (+)
AMCG00021705 gabbr2,LOC102793833 coding downstream 584318 26417306 ~ 26432305 (+)
G87704 NA non-coding upstream 302869 25529324 ~ 25529585 (+)
G87525 NA non-coding upstream 1471545 24359504 ~ 24360909 (+)
G87482 NA non-coding upstream 1570837 24260962 ~ 24261617 (+)
G87464 fkbp14,LOC107685615,LOC107596753,LOC107743226,LOC107550815 non-coding upstream 1613630 24216374 ~ 24218824 (+)
G87423 LOC103376870 non-coding upstream 1692946 24080736 ~ 24139508 (+)
G87786 NA non-coding downstream 52458 25885446 ~ 25885703 (+)
G87824 NA non-coding downstream 258188 26091176 ~ 26094196 (+)
G87939 NA non-coding downstream 877229 26710217 ~ 26713476 (+)
G87942 NA non-coding downstream 887921 26720909 ~ 26737883 (+)
G87961 NA non-coding downstream 975269 26808257 ~ 26810867 (+)
AMCG00021692 NA other upstream 79201 25752357 ~ 25753253 (+)
AMCG00021682 NA other upstream 460115 25276776 ~ 25372339 (+)
AMCG00021676 kcnh8,LOC106570508,LOC106941718 other upstream 883354 24909884 ~ 24949100 (+)
AMCG00021657 NA other upstream 1633627 24183208 ~ 24198827 (+)
AMCG00021656 NA other upstream 1654362 24174403 ~ 24178092 (+)
AMCG00021693 NA other downstream 10706 25843694 ~ 25870195 (+)
AMCG00021703 galnt12 other downstream 319080 26152068 ~ 26197076 (+)
AMCG00021707 NA other downstream 702105 26535093 ~ 26569148 (+)
AMCG00021745 NA other downstream 1799927 27632915 ~ 27637084 (+)
G88238 NA other downstream 2945327 28778315 ~ 28778733 (+)

Expression


Co-expression Network