G87806


Basic Information

Item Value
gene id G87806
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 25905444 ~ 25908005 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU109596
ttaaggaaataactctacctaaaatcacgccccccaattatgacgtaggaatatcAATAAGGCTaggtcatacgtcataacaaaataggctgcgcccataggaccctactatctactcaCACATAGACTGGAAAAggccagttgggactacagaagcagaaatagaaatggttgagatggtaaatgactgctttctaacacaatttgtcagggaaccaaccagggagagcgcatgcattgacttgatagtttcaaatgaccaagatagagtcagagggacactagttagataaccaatggcaaactgtgatcacaatatggttagctttgagtcattatttcaaaaaacaagtctaaaacaatggtctacagttttagaaaagcaaaccttgaaggtatgaggcagcacttagaagaggaaGACTGGAGCACaatggatacagattcagttgaaaatggatggttatattttaataaatttgtaccaaaactttgaggaccaaaaaacattggccaaaatgctttaatagaagtatacaaaaaaaatcaagagaaataaaatgttgtattgtgcatacaaaagggatagagatgaaacaagaTACaaagaactgcaaagagatcttaagaaagggatcaggaaagtaaagagggaaatgaaaagaaacatagctcttgggagattaaactaatgcaaagagcttcttccaatactacaacagcaataggtcaataaaggaggaagtgaaacagataaagagcAAACATTGAAGTaattggaaaacgaacaagatgtggcaaatgttctaaattagtatttcacaaaGGTTTTtacgaaagaaaaaaaagataacatgccacaggttaacaatcaatccagtcaaaccctaagagagatcagcataaatgaggaggagatattaaagggactagcagaataaaaaacaaacaaatcacctgagccagatggtatatttccaagagtacttaaagaaattagggaaattatttataggccgctaactcaaatattccaaatgacacttagaacaggggatgtgccaactgactggaagatggcaaatgtcataaatcaaatctgtatttttttttgttggcttTGGTAGCTTGCCCCTAATAAACTGtccttcctttcatttttattaggGCAAGGCCGTGTTTTCTACAAACTCACCCTGTGTGGAATCCACATAGACTGTCAACAGCTGAGTGGCTTATCTGAATGCTATGAGGTaatgattttcaaaagaaatCACAAAGTGTTTAGGCAGATTGTACATTGTACTGTACTTCAtgcaatacataaatcaataaaatggcaataacccataaattacaaaatataaaaaggcaaatgtaagcaaattacttcaattaagggttcgataaagtaattgagagctgggctgcaaaaactaaaaaacagcagggtagggggtcctccgtaaccagggttgagaaccactgagaTAGTGTGACACCTTCAAATAATACTGTCACTTTCTTAGAAAAGCAATGCCAGTGCTGTTCTCATTCCCCTTGCATTCACAAGTGATGGAAATGCTGGGAAAGAGAGTGGCTTCCAGACTCAACATTAATTGGTTTGATTATCTGGATGTTTCGTCAAGGCACCTGATCAATCAGTGGCCCAGGTATCAGAACGTGGATGAAGAGGTGTCACCTGTATGATAAACGGGACCGAATTCATCATGGACAGTAAGTCACAATTTCTCAGGGACCAAAAAAATGGTTAATATTTTCTGTTAGGAATCACTAATTATAATGGCCAATTACAATTATGATATATTGTGACACTTCTACAGGCCCAGGAGCGACAACGTTTGTACAACAGGGGAGCCCATGTTATTCCCAACCAACTTCTAAATTGCTGGCAAAGTGGCAGGTACCCTTTGTGGTCACATGCCTCTTAGGTGAGGTCGATTATGAGGTGTGTTGACCGGACCGTCGGAGAGAAAAGTAGATATACCATCTcaacatgctgaagaagtggcAAGAGGAGGAAGCATTATGTGCCTCTAGTTCCTCCCAAATTAAGCAGCCTGAATCCGCTGTTTCTGAGGTTTGCATTGACCCCAATTTAACAAATGCGCAGAAACCGCAAGTTCGCTCTTTATTTACCAGCTTCCATCATGTATTTTCTCACCAACCCAGGCTCACACCTCTCATCGAGCACTATATTCACAAAGCACTGGACACCTGTGTGCGTATAAAACCCAATCGCACCCCCTATTATAGAAAGCAGGCTGTTAATGCAGAAGTGCAAAAGATGTTGGAGCTGGGAGTTGTAGAAAAATCACAGTCGGAGTGGTGTAGCCCTATAGTCTTAGTGCCAAAGCCTGACGGCAGCACCAGATTCTGTGTTGATTATAGGGAGCTCAACGCAGTGTCTAGGTTTGATGCCTATCCGATGCCCCGTGTGGAGGAGTTACTGGACCGGCTGGGCGCTGCTCACTTTTTTACGACACTGGACTTAAACCAAGGGATACTGGCAGATCCCCCTCAGTCCACTCCTCATGGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU109596 True 2562 TUCP 0.40 1 25905444 25908005

Neighbor

gene id symbol gene type direction distance location
AMCG00021695 NA coding downstream 21212 25873891 ~ 25884232 (-)
AMCG00021696 NA coding downstream 105780 25719357 ~ 25799664 (-)
AMCG00021690 NA coding downstream 191678 25705576 ~ 25713766 (-)
AMCG00021691 top2b,LOC106570304 coding downstream 200616 25682770 ~ 25704828 (-)
AMCG00021686 nkiras1,LOC106588667 coding downstream 493882 25406702 ~ 25411562 (-)
AMCG00021699 elmo1,LOC107710279,LOC107556397 coding upstream 54909 25962914 ~ 25976336 (-)
AMCG00021698 elmo1,LOC106570440,LOC106515744,LOC107702083 coding upstream 117393 26025398 ~ 26056857 (-)
AMCG00021701 NA coding upstream 175773 26083778 ~ 26089986 (-)
AMCG00021710 NA coding upstream 532650 26440655 ~ 26472215 (-)
AMCG00021709 NA coding upstream 656201 26564206 ~ 26566938 (-)
G87803 NA non-coding downstream 7403 25896958 ~ 25898041 (-)
G87800 NA non-coding downstream 19467 25885334 ~ 25885977 (-)
G87767 NA non-coding downstream 96240 25803340 ~ 25809204 (-)
G87756 NA non-coding downstream 135548 25769396 ~ 25769896 (-)
G87720 NA non-coding downstream 224424 25678187 ~ 25681020 (-)
G87882 NA non-coding upstream 486946 26394951 ~ 26395179 (-)
G87883 gabbr2 non-coding upstream 510675 26418680 ~ 26418899 (-)
G87884 NA non-coding upstream 524139 26432144 ~ 26437893 (-)
G87980 NA non-coding upstream 890086 26798091 ~ 26800715 (-)
G87992 NA non-coding upstream 984471 26892476 ~ 26895336 (-)
G87674 NA other downstream 498906 25403650 ~ 25406538 (-)
AMCG00021668 NA other downstream 1541985 24342900 ~ 24363459 (-)
AMCG00021662 NA other downstream 1695239 24199536 ~ 24210205 (-)
AMCG00021634 NA other downstream 2406683 23495025 ~ 23498761 (-)
G87263 NA other downstream 2566960 23338251 ~ 23338484 (-)
AMCG00021700 NA other upstream 183222 26091227 ~ 26105391 (-)
G87871 NA other upstream 244100 26152105 ~ 26154375 (-)
AMCG00021719 ndrg1a other upstream 766073 26674078 ~ 26718508 (-)
AMCG00021723 hsf1 other upstream 991958 26899963 ~ 26919844 (-)
G88242 LOC106595015,LOC106598893,LOC106597821 other upstream 2873797 28781802 ~ 28783281 (-)

Expression


Co-expression Network