G87871


Basic Information

Item Value
gene id G87871
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 26152105 ~ 26154375 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU109676
TGAATTCCCACCAAGCAGGTATTcttgattgattgaattaataaaaccatCTCCAAATGGAagaacatttcataaaataactttttccaATGACGCTACAGTTCAGATTTTGCTTTGCCTTGTATAGATGCCTTTCACAAAATCCAGAATTCAGGGTTTAACTATTCCCGATGCTGCTGTAGGCAAAATAACTCAGATGGTTTCTAGAAGGCATACAATGAAGGGACTGCAGCACAGTGTACACGTTCACACCTCTGTCACTGTAGTCATCGACCAGGATGATTTCCTTGAGCAGGATGTCAGGCGAGGTCTCCAGAACGCTGTGAACGGTCCGCAGCAGTGTGGACCAGGCCTCGTTGTAAAATGCAATGACAACAGATGTGGTTGGCATGCTGAGATAATCATACTTCAGATCTTTAACAGGGGGTTCCACCTCTCCGGCAGCCTGCGGTGCAGAGAGATCTTCTCGCTCAGATAAATGTTGATCTGGTGCTTTTTAATGCTTTCCTCCTCtttcctcttctcctctccttccAAGTCCAGCTTGACAGCAGCCCCCCACTCCCCAAGCGCACTGGCGTCCAGAGGGGGCTTCTCATACACGGGTCTCCTGAGCTGCTCCAGCTCCGGTGCGTCCCCACCTGTTGACAGCCCTCGCCTCTCCGCAGCGCCGACCTCCcggccccggccccggccccggccccggccccgGCTCAGGAACACGTACCCGACAGCGGACGCCCCCAGGATCAAGAGCAGCAACTTGAGCCGCTGTCGTCGGCCTCGGTGTGCCATGGTGCCCAGATGGTGCCCCTGCGCTCCCGACACTCGCAGCCTCGGCCAGTGCGGTGAAATGTCACGTCTCCATCGGCCGGGCGAGCGGGCGAATGAGAAACTTGTGCATCGCTGATAGTAGTAACGGAGGCGGGCGCTGGCTGCAGCCGCACGGGTCTCCTCCCCTGCTCAAGTCGTGCTGCAGATTCCCAAAGCAGGGCAATGTGTCATGTTTCTCAACTTATTTGTGTTGGCTGGTCATTGTGGAGCTTGAACACAAACCAGCCGTGCAGGGCAGTGCCGCCGTGAAACAGATTACAGTCGGATTACACTAGATTAGCGCGCACAGGTCACACGCCGCGCACTAATCCAGACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU109676 True 1150 TUCP 0.55 2 26152105 26154375

Neighbor

gene id symbol gene type direction distance location
AMCG00021701 NA coding downstream 62119 26083778 ~ 26089986 (-)
AMCG00021698 elmo1,LOC106570440,LOC106515744,LOC107702083 coding downstream 95248 26025398 ~ 26056857 (-)
AMCG00021699 elmo1,LOC107710279,LOC107556397 coding downstream 175769 25962914 ~ 25976336 (-)
AMCG00021695 NA coding downstream 267873 25873891 ~ 25884232 (-)
AMCG00021696 NA coding downstream 352441 25719357 ~ 25799664 (-)
AMCG00021710 NA coding upstream 286280 26440655 ~ 26472215 (-)
AMCG00021709 NA coding upstream 409831 26564206 ~ 26566938 (-)
AMCG00021716 NA coding upstream 489379 26643754 ~ 26656084 (-)
AMCG00021724 csk21,LOC105902032,LOC105022821,LOC107589440,LOC107693292,LOC107559708,LOC105910791,LOC107670008 coding upstream 650665 26805040 ~ 26824298 (-)
AMCG00021725 NA coding upstream 791797 26946172 ~ 26946690 (-)
G87803 NA non-coding downstream 254064 25896958 ~ 25898041 (-)
G87800 NA non-coding downstream 266128 25885334 ~ 25885977 (-)
G87767 NA non-coding downstream 342901 25803340 ~ 25809204 (-)
G87756 NA non-coding downstream 382209 25769396 ~ 25769896 (-)
G87720 NA non-coding downstream 471085 25678187 ~ 25681020 (-)
G87882 NA non-coding upstream 240576 26394951 ~ 26395179 (-)
G87883 gabbr2 non-coding upstream 264305 26418680 ~ 26418899 (-)
G87884 NA non-coding upstream 277769 26432144 ~ 26437893 (-)
G87980 NA non-coding upstream 643716 26798091 ~ 26800715 (-)
G87992 NA non-coding upstream 738101 26892476 ~ 26895336 (-)
AMCG00021700 NA other downstream 46714 26091227 ~ 26105391 (-)
G87806 NA other downstream 244100 25905444 ~ 25908005 (-)
G87674 NA other downstream 745567 25403650 ~ 25406538 (-)
AMCG00021668 NA other downstream 1788646 24342900 ~ 24363459 (-)
AMCG00021662 NA other downstream 1941900 24199536 ~ 24210205 (-)
AMCG00021719 ndrg1a other upstream 519703 26674078 ~ 26718508 (-)
AMCG00021723 hsf1 other upstream 745588 26899963 ~ 26919844 (-)
G88242 LOC106595015,LOC106598893,LOC106597821 other upstream 2627427 28781802 ~ 28783281 (-)
G88288 ctdp1,LOC107745039,LOC107698650,LOC107748359,LOC107672848 other upstream 2914826 29069201 ~ 29071760 (-)
G88405 dtbp1,dtnbp1,LOC106596829,LOC106606149,LOC106596393 other upstream 3575702 29730077 ~ 29742808 (-)

Expression


Co-expression Network