G88025


Basic Information

Item Value
gene id G88025
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 27060182 ~ 27060389 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU109875
CTTCTAATGACATGTTATCAGATCCATTCTGAACATGATCAAAAATATAATCCAGAAAATATTCTCCTGCTGGCAGAACTCGCACACTCATACAATCCCCTCTGAGCACATGGTAAATGATGTTGCCGAAGACAACGTCAATGCTCTGTGTGAATTCATCACTTGAGGAAATGTTGCTTTCTTCAAGAATGTGACTTCCTGTGAGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU109875 True 208 lncRNA 0.40 1 27060182 27060389

Neighbor

gene id symbol gene type direction distance location
AMCG00021727 NA coding upstream 6116 27026147 ~ 27054066 (+)
AMCG00021728 LOC102788509,LOC106570431,LOC106588958 coding upstream 35275 27011922 ~ 27024907 (+)
AMCG00021730 NA coding upstream 48272 27010869 ~ 27011910 (+)
AMCG00021729 NA coding upstream 57612 27001117 ~ 27002570 (+)
AMCG00021726 bop1,LOC107693294,LOC107753474,LOC107669991 coding upstream 81283 26954157 ~ 26978899 (+)
AMCG00021733 scrt1,scrt1b,LOC105018847,LOC105904905,LOC107741724,LOC105910659,LOC107587804 coding downstream 60942 27121331 ~ 27123223 (+)
AMCG00021734 NA coding downstream 201450 27261839 ~ 27287320 (+)
AMCG00021737 NA coding downstream 234700 27295089 ~ 27315993 (+)
AMCG00021739 NA coding downstream 271226 27331615 ~ 27332691 (+)
AMCG00021740 NA coding downstream 337180 27397569 ~ 27405275 (+)
G88024 NA non-coding upstream 2571 27057374 ~ 27057611 (+)
G87993 NA non-coding upstream 153817 26896725 ~ 26906365 (+)
G87962 csk21,LOC107734013,LOC108425256,LOC105910791,LOC105902032,LOC105022821,LOC108267736 non-coding upstream 242900 26813030 ~ 26817282 (+)
G87961 NA non-coding upstream 249315 26808257 ~ 26810867 (+)
G87942 NA non-coding upstream 322299 26720909 ~ 26737883 (+)
G88026 NA non-coding downstream 1430 27061819 ~ 27062090 (+)
G88027 NA non-coding downstream 3174 27063563 ~ 27063951 (+)
G88043 NA non-coding downstream 78438 27138827 ~ 27139443 (+)
G88045 NA non-coding downstream 135263 27195652 ~ 27195870 (+)
G88076 NA non-coding downstream 348470 27408859 ~ 27409687 (+)
AMCG00021707 NA other upstream 491034 26535093 ~ 26569148 (+)
AMCG00021703 galnt12 other upstream 863106 26152068 ~ 26197076 (+)
AMCG00021693 NA other upstream 1189987 25843694 ~ 25870195 (+)
AMCG00021692 NA other upstream 1306929 25752357 ~ 25753253 (+)
AMCG00021682 NA other upstream 1687843 25276776 ~ 25372339 (+)
AMCG00021745 NA other downstream 572526 27632915 ~ 27637084 (+)
G88238 NA other downstream 1717926 28778315 ~ 28778733 (+)
G88276 NA other downstream 2000498 29060887 ~ 29065339 (+)
AMCG00021772 NA other downstream 2204438 29264827 ~ 29275347 (+)
AMCG00021779 LOC108438266,LOC105891906 other downstream 2318186 29378575 ~ 29385325 (+)

Expression


Co-expression Network