G88026


Basic Information

Item Value
gene id G88026
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 27061819 ~ 27062090 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU109876
CTGATCTCTGCCTGTTGCTAGGTAATGCCTTTGAATTTTGTCGAGCAAGTGATCTACCACGTGGCTGAGGCCCTCTCCTTCGATGTCTTTGACACGCTCAACAAAAGCGTTTGTCTCCCTCTGCCACCTGCTTTCCTTCACAGCAAGACAGGCTTCGAGAGGACTGCTCAGGTAGAAACACAATCCAGCCGCGACCGCGAAAAAGTCTTCACTGCGAACACTGTCTACCGGGAAACTGCTGGAGAGCTGAGACAAACTCTCAGGAGAGAGac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU109876 True 272 lncRNA 0.52 1 27061819 27062090

Neighbor

gene id symbol gene type direction distance location
AMCG00021727 NA coding upstream 7753 27026147 ~ 27054066 (+)
AMCG00021728 LOC102788509,LOC106570431,LOC106588958 coding upstream 36912 27011922 ~ 27024907 (+)
AMCG00021730 NA coding upstream 49909 27010869 ~ 27011910 (+)
AMCG00021729 NA coding upstream 59249 27001117 ~ 27002570 (+)
AMCG00021726 bop1,LOC107693294,LOC107753474,LOC107669991 coding upstream 82920 26954157 ~ 26978899 (+)
AMCG00021733 scrt1,scrt1b,LOC105018847,LOC105904905,LOC107741724,LOC105910659,LOC107587804 coding downstream 59241 27121331 ~ 27123223 (+)
AMCG00021734 NA coding downstream 199749 27261839 ~ 27287320 (+)
AMCG00021737 NA coding downstream 232999 27295089 ~ 27315993 (+)
AMCG00021739 NA coding downstream 269525 27331615 ~ 27332691 (+)
AMCG00021740 NA coding downstream 335479 27397569 ~ 27405275 (+)
G88025 NA non-coding upstream 1430 27060182 ~ 27060389 (+)
G88024 NA non-coding upstream 4208 27057374 ~ 27057611 (+)
G87993 NA non-coding upstream 155454 26896725 ~ 26906365 (+)
G87962 csk21,LOC107734013,LOC108425256,LOC105910791,LOC105902032,LOC105022821,LOC108267736 non-coding upstream 244537 26813030 ~ 26817282 (+)
G87961 NA non-coding upstream 250952 26808257 ~ 26810867 (+)
G88027 NA non-coding downstream 1473 27063563 ~ 27063951 (+)
G88043 NA non-coding downstream 76737 27138827 ~ 27139443 (+)
G88045 NA non-coding downstream 133562 27195652 ~ 27195870 (+)
G88076 NA non-coding downstream 346769 27408859 ~ 27409687 (+)
G88145 NA non-coding downstream 530540 27592630 ~ 27594570 (+)
AMCG00021707 NA other upstream 492671 26535093 ~ 26569148 (+)
AMCG00021703 galnt12 other upstream 864743 26152068 ~ 26197076 (+)
AMCG00021693 NA other upstream 1191624 25843694 ~ 25870195 (+)
AMCG00021692 NA other upstream 1308566 25752357 ~ 25753253 (+)
AMCG00021682 NA other upstream 1689480 25276776 ~ 25372339 (+)
AMCG00021745 NA other downstream 570825 27632915 ~ 27637084 (+)
G88238 NA other downstream 1716225 28778315 ~ 28778733 (+)
G88276 NA other downstream 1998797 29060887 ~ 29065339 (+)
AMCG00021772 NA other downstream 2202737 29264827 ~ 29275347 (+)
AMCG00021779 LOC108438266,LOC105891906 other downstream 2316485 29378575 ~ 29385325 (+)

Expression


Co-expression Network