Gene
RNA
| Item | Value |
|---|---|
| gene id | G88153 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030130.1 |
| NCBI id | CM030130.1 |
| chromosome length | 39556810 |
| location | 27619820 ~ 27620091 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU110025 | True | 272 | lncRNA | 0.46 | 1 | 27619820 | 27620091 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00021744 | rplp1 | coding | downstream | 32681 | 27584420 ~ 27587139 (-) |
| AMCG00021743 | NA | coding | downstream | 179558 | 27416270 ~ 27440262 (-) |
| AMCG00021738 | cfap20 | coding | downstream | 327824 | 27287252 ~ 27291996 (-) |
| AMCG00021735 | LOC105904932,LOC108429636 | coding | downstream | 358469 | 27236574 ~ 27261351 (-) |
| AMCG00021736 | NA | coding | downstream | 417515 | 27196092 ~ 27202305 (-) |
| AMCG00021747 | NA | coding | upstream | 18491 | 27638582 ~ 27640909 (-) |
| AMCG00021755 | NA | coding | upstream | 595731 | 28215822 ~ 28218715 (-) |
| AMCG00021756 | NA | coding | upstream | 614549 | 28234640 ~ 28239140 (-) |
| AMCG00021757 | khdrbs3,LOC106521499,LOC106531515 | coding | upstream | 966085 | 28586176 ~ 28591802 (-) |
| AMCG00021767 | NA | coding | upstream | 1423407 | 29043498 ~ 29047472 (-) |
| G88095 | NA | non-coding | downstream | 210109 | 27409423 ~ 27409711 (-) |
| G87992 | NA | non-coding | downstream | 724484 | 26892476 ~ 26895336 (-) |
| G87980 | NA | non-coding | downstream | 819105 | 26798091 ~ 26800715 (-) |
| G87884 | NA | non-coding | downstream | 1181927 | 26432144 ~ 26437893 (-) |
| G87883 | gabbr2 | non-coding | downstream | 1200921 | 26418680 ~ 26418899 (-) |
| G88154 | NA | non-coding | upstream | 7029 | 27627120 ~ 27631668 (-) |
| G88157 | NA | non-coding | upstream | 14813 | 27634904 ~ 27636720 (-) |
| G88190 | NA | non-coding | upstream | 483239 | 28103330 ~ 28103666 (-) |
| G88191 | NA | non-coding | upstream | 512475 | 28132566 ~ 28132863 (-) |
| G88201 | NA | non-coding | upstream | 646621 | 28266712 ~ 28267553 (-) |
| AMCG00021723 | hsf1 | other | downstream | 699976 | 26899963 ~ 26919844 (-) |
| AMCG00021719 | ndrg1a | other | downstream | 901312 | 26674078 ~ 26718508 (-) |
| G87871 | NA | other | downstream | 1465445 | 26152105 ~ 26154375 (-) |
| AMCG00021700 | NA | other | downstream | 1514429 | 26091227 ~ 26105391 (-) |
| G87806 | NA | other | downstream | 1711815 | 25905444 ~ 25908005 (-) |
| G88242 | LOC106595015,LOC106598893,LOC106597821 | other | upstream | 1161711 | 28781802 ~ 28783281 (-) |
| G88288 | ctdp1,LOC107745039,LOC107698650,LOC107748359,LOC107672848 | other | upstream | 1449110 | 29069201 ~ 29071760 (-) |
| G88405 | dtbp1,dtnbp1,LOC106596829,LOC106606149,LOC106596393 | other | upstream | 2109986 | 29730077 ~ 29742808 (-) |
| G88527 | NA | other | upstream | 2717492 | 30337583 ~ 30424612 (-) |
| AMCG00021820 | NA | other | upstream | 3257757 | 30877848 ~ 30888588 (-) |
