Gene
RNA
| Item | Value |
|---|---|
| gene id | G88238 |
| gene name | NA |
| gene type | unknown |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030130.1 |
| NCBI id | CM030130.1 |
| chromosome length | 39556810 |
| location | 28778315 ~ 28778733 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU110128 | True | 419 | TUCP | 0.50 | 1 | 28778315 | 28778733 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00021762 | NA | coding | upstream | 267500 | 28510456 ~ 28510815 (+) |
| AMCG00021761 | NA | coding | upstream | 268280 | 28509629 ~ 28510035 (+) |
| AMCG00021763 | NA | coding | upstream | 268841 | 28506377 ~ 28509474 (+) |
| AMCG00021758 | fam135b,LOC102788634 | coding | upstream | 439795 | 28317272 ~ 28338520 (+) |
| AMCG00021753 | NA | coding | upstream | 565389 | 28206504 ~ 28212926 (+) |
| AMCG00021759 | NA | coding | downstream | 49253 | 28827986 ~ 28830377 (+) |
| AMCG00021764 | NA | coding | downstream | 212857 | 28991590 ~ 29005897 (+) |
| AMCG00021765 | NA | coding | downstream | 228663 | 29007396 ~ 29021741 (+) |
| AMCG00021766 | cpsf1 | coding | downstream | 246830 | 29025563 ~ 29041941 (+) |
| AMCG00021768 | NA | coding | downstream | 297368 | 29076101 ~ 29095261 (+) |
| G88232 | NA | non-coding | upstream | 3122 | 28774871 ~ 28775193 (+) |
| G88225 | NA | non-coding | upstream | 80230 | 28697878 ~ 28698085 (+) |
| G88161 | si:dkey-218f9.10,trappc9,LOC107669949 | non-coding | upstream | 796188 | 27888558 ~ 27982127 (+) |
| G88150 | NA | non-coding | upstream | 1146661 | 27627052 ~ 27631654 (+) |
| G88151 | NA | non-coding | upstream | 1156435 | 27620356 ~ 27621880 (+) |
| G88237 | NA | non-coding | downstream | 52173 | 28830906 ~ 28831323 (+) |
| G88248 | LOC101154678 | non-coding | downstream | 123665 | 28902398 ~ 28902614 (+) |
| G88249 | NA | non-coding | downstream | 142896 | 28921629 ~ 28969948 (+) |
| G88306 | NA | non-coding | downstream | 500444 | 29279177 ~ 29280833 (+) |
| G88307 | NA | non-coding | downstream | 519104 | 29297837 ~ 29298080 (+) |
| AMCG00021745 | NA | other | upstream | 1141231 | 27632915 ~ 27637084 (+) |
| AMCG00021707 | NA | other | upstream | 2209167 | 26535093 ~ 26569148 (+) |
| AMCG00021703 | galnt12 | other | upstream | 2581239 | 26152068 ~ 26197076 (+) |
| AMCG00021693 | NA | other | upstream | 2908120 | 25843694 ~ 25870195 (+) |
| AMCG00021692 | NA | other | upstream | 3025062 | 25752357 ~ 25753253 (+) |
| G88276 | NA | other | downstream | 282154 | 29060887 ~ 29065339 (+) |
| AMCG00021772 | NA | other | downstream | 486094 | 29264827 ~ 29275347 (+) |
| AMCG00021779 | LOC108438266,LOC105891906 | other | downstream | 599842 | 29378575 ~ 29385325 (+) |
| AMCG00021803 | clg22h6orf62,clg10h6orf62,c24h6orf62,LOC106515831,LOC101464686,LOC108240366,LOC104924567,LOC102228185,LOC103135136 | other | downstream | 1488669 | 30267402 ~ 30407772 (+) |
| AMCG00021802 | kdm1b | other | downstream | 1671224 | 30449957 ~ 30468920 (+) |
