Gene
RNA
| Item | Value |
|---|---|
| gene id | G88276 |
| gene name | NA |
| gene type | unknown |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030130.1 |
| NCBI id | CM030130.1 |
| chromosome length | 39556810 |
| location | 29060887 ~ 29065339 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0051056 | regulation of small GTPase mediated signal transduction | biological_process |
| GO:0050780 | dopamine receptor binding | molecular_function |
| GO:0031752 | D5 dopamine receptor binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU110172 | True | 751 | TUCP | 0.58 | 3 | 29060887 | 29065339 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00021766 | cpsf1 | coding | upstream | 18946 | 29025563 ~ 29041941 (+) |
| AMCG00021765 | NA | coding | upstream | 39146 | 29007396 ~ 29021741 (+) |
| AMCG00021764 | NA | coding | upstream | 54990 | 28991590 ~ 29005897 (+) |
| AMCG00021759 | NA | coding | upstream | 230510 | 28827986 ~ 28830377 (+) |
| AMCG00021760 | NA | coding | upstream | 256711 | 28767415 ~ 28804176 (+) |
| AMCG00021768 | NA | coding | downstream | 10762 | 29076101 ~ 29095261 (+) |
| AMCG00021769 | NA | coding | downstream | 144938 | 29210277 ~ 29223312 (+) |
| AMCG00021781 | NA | coding | downstream | 540801 | 29606140 ~ 29648683 (+) |
| AMCG00021782 | NA | coding | downstream | 688072 | 29753411 ~ 29782570 (+) |
| AMCG00021784 | LOC107677448,LOC106606150 | coding | downstream | 723395 | 29788734 ~ 29804747 (+) |
| G88249 | NA | non-coding | upstream | 90939 | 28921629 ~ 28969948 (+) |
| G88248 | LOC101154678 | non-coding | upstream | 158273 | 28902398 ~ 28902614 (+) |
| G88237 | NA | non-coding | upstream | 229564 | 28830906 ~ 28831323 (+) |
| G88232 | NA | non-coding | upstream | 285694 | 28774871 ~ 28775193 (+) |
| G88225 | NA | non-coding | upstream | 362802 | 28697878 ~ 28698085 (+) |
| G88306 | NA | non-coding | downstream | 213838 | 29279177 ~ 29280833 (+) |
| G88307 | NA | non-coding | downstream | 232498 | 29297837 ~ 29298080 (+) |
| G88308 | NA | non-coding | downstream | 242540 | 29307879 ~ 29315559 (+) |
| G88352 | NA | non-coding | downstream | 311182 | 29376521 ~ 29388601 (+) |
| G88403 | NA | non-coding | downstream | 659820 | 29725159 ~ 29725962 (+) |
| G88238 | NA | other | upstream | 282154 | 28778315 ~ 28778733 (+) |
| AMCG00021745 | NA | other | upstream | 1423803 | 27632915 ~ 27637084 (+) |
| AMCG00021707 | NA | other | upstream | 2491739 | 26535093 ~ 26569148 (+) |
| AMCG00021703 | galnt12 | other | upstream | 2863811 | 26152068 ~ 26197076 (+) |
| AMCG00021693 | NA | other | upstream | 3190692 | 25843694 ~ 25870195 (+) |
| AMCG00021772 | NA | other | downstream | 199488 | 29264827 ~ 29275347 (+) |
| AMCG00021779 | LOC108438266,LOC105891906 | other | downstream | 313236 | 29378575 ~ 29385325 (+) |
| AMCG00021803 | clg22h6orf62,clg10h6orf62,c24h6orf62,LOC106515831,LOC101464686,LOC108240366,LOC104924567,LOC102228185,LOC103135136 | other | downstream | 1202063 | 30267402 ~ 30407772 (+) |
| AMCG00021802 | kdm1b | other | downstream | 1384618 | 30449957 ~ 30468920 (+) |
| AMCG00021881 | LOC107748698,LOC102792383,LOC101481807,LOC108256925,LOC106919167,LOC108434168 | other | downstream | 5861214 | 34926553 ~ 35077090 (+) |
