G88403


Basic Information

Item Value
gene id G88403
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 29725159 ~ 29725962 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU110328
AGGATGACCTGTGATGATAACTTAGCGGTTTGGTGTGCTCAGAAGGAGAAAAGTCCTCCATTTGTGTACAGATTTGAACCTGGCGGTGGATGGGGAAGTGGTGATGCTGTCTGCCCACTGGGAGAAGAAGAGGGCCGCAGTGTCCGAGCTCCAGGAACAGCTCCAGCAAATTCCTGCTTTCCTCACCGATCTGGAGTCCGTCACCTCTCACATTGGTGAGTGTAATTTCCTTCATCTACATTACAGGCGTCAGTGCAATGACAAATGTGCTGAAATAGTGTTGAAATATTATAGTGTGACCTCCTGTCAG

Function

NR:

description
PREDICTED: fatty acid synthase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU110328 True 310 lncRNA 0.49 2 29725159 29725962

Neighbor

gene id symbol gene type direction distance location
AMCG00021781 NA coding upstream 76476 29606140 ~ 29648683 (+)
AMCG00021769 NA coding upstream 501847 29210277 ~ 29223312 (+)
AMCG00021768 NA coding upstream 629898 29076101 ~ 29095261 (+)
AMCG00021766 cpsf1 coding upstream 683218 29025563 ~ 29041941 (+)
AMCG00021765 NA coding upstream 703418 29007396 ~ 29021741 (+)
AMCG00021782 NA coding downstream 27449 29753411 ~ 29782570 (+)
AMCG00021784 LOC107677448,LOC106606150 coding downstream 62772 29788734 ~ 29804747 (+)
AMCG00021785 gmpr,LOC108425204,LOC108257268,LOC103024228 coding downstream 89528 29815490 ~ 29830397 (+)
AMCG00021790 NA coding downstream 351410 30077372 ~ 30091490 (+)
AMCG00021792 NA coding downstream 367907 30093869 ~ 30103130 (+)
G88352 NA non-coding upstream 336558 29376521 ~ 29388601 (+)
G88308 NA non-coding upstream 409600 29307879 ~ 29315559 (+)
G88307 NA non-coding upstream 427079 29297837 ~ 29298080 (+)
G88306 NA non-coding upstream 444326 29279177 ~ 29280833 (+)
G88249 NA non-coding upstream 755211 28921629 ~ 28969948 (+)
G88440 NA non-coding downstream 249079 29975041 ~ 29978559 (+)
G88450 NA non-coding downstream 321166 30047128 ~ 30048888 (+)
G88454 NA non-coding downstream 411576 30137538 ~ 30139284 (+)
G88452 NA non-coding downstream 416233 30142195 ~ 30219496 (+)
G88485 NA non-coding downstream 530062 30256024 ~ 30258197 (+)
AMCG00021779 LOC108438266,LOC105891906 other upstream 339834 29378575 ~ 29385325 (+)
AMCG00021772 NA other upstream 449812 29264827 ~ 29275347 (+)
G88276 NA other upstream 659820 29060887 ~ 29065339 (+)
G88238 NA other upstream 946426 28778315 ~ 28778733 (+)
AMCG00021745 NA other upstream 2088075 27632915 ~ 27637084 (+)
AMCG00021803 clg22h6orf62,clg10h6orf62,c24h6orf62,LOC106515831,LOC101464686,LOC108240366,LOC104924567,LOC102228185,LOC103135136 other downstream 541440 30267402 ~ 30407772 (+)
AMCG00021802 kdm1b other downstream 723995 30449957 ~ 30468920 (+)
AMCG00021881 LOC107748698,LOC102792383,LOC101481807,LOC108256925,LOC106919167,LOC108434168 other downstream 5200591 34926553 ~ 35077090 (+)
G89142 NA other downstream 5485171 35211133 ~ 35263537 (+)
G89299 NA other downstream 6238609 35964571 ~ 35967384 (+)

Expression


Co-expression Network