G88527


Basic Information

Item Value
gene id G88527
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 30337583 ~ 30424612 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU110482
tttaatttatagAAAAGAAAGTAGATTCCTACTCTAAGTGAAAGGTCTACTCTAACTACTAATAGATGGGACTAATACAAACTTAAGTCATGTTTCGCGGTTTGTGAGAAGGTGCGAGTGGGGAAGGGGGGTTCATtcgcatttatttatttttaatttgatttaagaGATCATACTGATACTGAAGGAGAACAGAGCTAGTTATGCCAAAATACACGAAACAAATCCAGCCACTCAGTTTCACAGAAGGGTCCAAATAAACGAGTTtaaccaaaaggaaaaaaaaaaaaaaatcaaattaagatGCGGTATATTCCTACACACAATGCAATTGACAAGAACCGAAAGGAGGCGATCAAACCCATGCCGACACAATCGCTacgaaatataaaaacaaacaaacaaaaaaaaaagtacacttATGTTCGTCTTCTCCCAGCCTCGTCCATGGCTGGTGCTATTGGATTTGATTTCTCTCCAGAGACTACTTTTATGAACGCGTTATTAGAGGATGGGGAGTACAGAGGACCGAGGCAGGGAAAGGCAGATGCCGGGAGAGGATGGCCCCAGACGAAAGGgaaaaagacagagaagacaTGTCGGAGTTCACTGGCAATAGCACTGGCCCAGCAACTGTGTTCATAATGATGGCGTTTTCAAAGAGCCCGAGAGACGACAGACACGACCACTACATCTTATCCAGTGTGACGAGGCGTAATCGCGGCCTGCCAGTAAAAGGTGCGCTGCGTTTCCCTTTACATTCTCCGAGCGGTGCAGTGCTTCAGCTGAGGTTCAACTGCGCATTAGGCCATTTTTAAACCGCTTTCTAACGTGTCGCCATGCTTATACGCTTCACGCACCTACACGTCTTCCTTAGATCACCATCGCAAAAGTGATTCGACTATTTGTGTGATCTGACTTCGTAATAAATAGTTTTacttggttttcttttgttgtctgtgtgtgtgtgt

Function

GO:

id name namespace
GO:0015629 actin cytoskeleton cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU110482 True 971 TUCP 0.43 3 30337583 30424612

Neighbor

gene id symbol gene type direction distance location
AMCG00021797 LOC106570559,LOC105012503,LOC102295214 coding downstream 52447 30284672 ~ 30285136 (-)
AMCG00021796 LOC105009370,LOC106588819,LOC100696657,LOC107596629,LOC102210154,LOC107685565 coding downstream 72129 30256031 ~ 30265454 (-)
AMCG00021793 NA coding downstream 178876 30142222 ~ 30158707 (-)
AMCG00021788 NA coding downstream 288712 30047330 ~ 30048871 (-)
AMCG00021789 LOC105890378 coding downstream 292481 30042879 ~ 30045102 (-)
AMCG00021808 NA coding upstream 1504 30426116 ~ 30428501 (-)
AMCG00021807 NA coding upstream 9315 30433927 ~ 30444924 (-)
AMCG00021806 NA coding upstream 37399 30462011 ~ 30469642 (-)
AMCG00021809 NA coding upstream 94389 30519001 ~ 30519513 (-)
AMCG00021817 NA coding upstream 274737 30699349 ~ 30707723 (-)
G88435 NA non-coding downstream 390043 29888445 ~ 29947540 (-)
G88434 NA non-coding downstream 496044 29838518 ~ 29841539 (-)
G88347 NA non-coding downstream 1056710 29279361 ~ 29280873 (-)
G88245 NA non-coding downstream 1506359 28830158 ~ 28831224 (-)
G88244 NA non-coding downstream 1525618 28811763 ~ 28811965 (-)
G88545 NA non-coding upstream 692 30425304 ~ 30425552 (-)
G88562 NA non-coding upstream 101134 30525746 ~ 30562800 (-)
G88643 NA non-coding upstream 537091 30961703 ~ 30962096 (-)
G88736 NA non-coding upstream 1374140 31798752 ~ 31836239 (-)
G88742 NA non-coding upstream 1434797 31859409 ~ 31859833 (-)
G88405 dtbp1,dtnbp1,LOC106596829,LOC106606149,LOC106596393 other downstream 594775 29730077 ~ 29742808 (-)
G88288 ctdp1,LOC107745039,LOC107698650,LOC107748359,LOC107672848 other downstream 1265823 29069201 ~ 29071760 (-)
G88242 LOC106595015,LOC106598893,LOC106597821 other downstream 1554302 28781802 ~ 28783281 (-)
AMCG00021723 hsf1 other downstream 3417739 26899963 ~ 26919844 (-)
AMCG00021719 ndrg1a other downstream 3619075 26674078 ~ 26718508 (-)
AMCG00021820 NA other upstream 453236 30877848 ~ 30888588 (-)
AMCG00021830 eny2,LOC100694417,LOC103393926 other upstream 704971 31129583 ~ 31132185 (-)
AMCG00021849 NA other upstream 1638773 32063385 ~ 32069464 (-)
AMCG00021867 LOC107596751,LOC107685553,LOC107743232 other upstream 3835392 34260004 ~ 34356907 (-)
G89004 LOC107685553,LOC107596751,LOC107743232,LOC107662664,LOC108270036 other upstream 3922376 34346988 ~ 34380295 (-)

Expression


Co-expression Network