G88562


Basic Information

Item Value
gene id G88562
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 30525746 ~ 30562800 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU110527
CATTTGGTAATgtagtcatttttatttaatgcacaCAAAATGTCCATCTGTAACATGTTCAGCATATCCAGATTACATTCTCAGTCTcttcaaaagcaaaaagcagATCCAAAAGTCTTCAGTCAAACATCATGTTGCAGCTCTAACCTCTTATCACCTCTGGACTGACGGGATTATGTAAAAAGTTAGTGCTGAGGGACATTTATGCGAGTTAAACATGGTGGGAGCAACAGACTAGACTACTGGGGTGGCTCAGCTTATTGGAGTTTTATTAAGCTTTACGGCACATTATAAACCTGATAGCTTACTTTGCAGAAGTTGTAATGTAGGATTCATTGGATTGAATCTGGTTAAGGGTTGCCAGGGTGGGTTTAAATTGTATAGGCCTGAATCCACCTAGCTGATCCTCTTCccaacacacatatatatagatatgttaTCCAAAacttataattataacaattatataattatataaattttGGTTAACAGCAATGTATAAACGAAACTGAAGTGAAGACACTCGCACAAAACGCTATTGGGTAGCATGTGAACCAGCCTTTACTACCCATTCAGGACACGAGGGGAGCCCCGCTCATCCTCAACAAAATCTCATTTATACAGTACAGGAGAGGCGAAATACTGTTCCCACACATTGACAAAGGCTATACCATATTGGGCACGATTCATAGGAGTTGGCATATTTTAGATTAGCAGCGGcttctaaaaaaaatgttaaatgaggCTCTTGTGTCAGAATACACACGCACCGCATGTagttaagtttaaaatacaatcgGACAAAATAAAAACGGGCAGGTGAAACGGCAGGAACTAAAAATGGCATTCAATTGGTATTCAATTGGCATTGGTAGTCCTAACCGGAGTGATCGTCTTTcaaaagcacacaaagcacattgaCCTCTTCTGTGACATGACAGACCTAAGCTAAGCAATTGGACATCATGAGGTGGACTGAAGAAGCAAACAGACCTCCCTTACTCAGACTAGCTCTGGAGACTGCGCTCGCTAGTTTAATATTACACGGTTTGTGTGTGGTTAACAAATGCACCATGATTACACTGggaaaaacatttcagtagtttaattttttttttttttttttttttttttttttttta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU110527 True 1142 lncRNA 0.38 2 30525746 30562800

Neighbor

gene id symbol gene type direction distance location
AMCG00021809 NA coding downstream 6233 30519001 ~ 30519513 (-)
AMCG00021806 NA coding downstream 56104 30462011 ~ 30469642 (-)
AMCG00021807 NA coding downstream 80822 30433927 ~ 30444924 (-)
AMCG00021808 NA coding downstream 97245 30426116 ~ 30428501 (-)
AMCG00021805 acot13,LOC102778390 coding downstream 129828 30394379 ~ 30395918 (-)
AMCG00021817 NA coding upstream 136549 30699349 ~ 30707723 (-)
AMCG00021816 NA coding upstream 146025 30708825 ~ 30719230 (-)
AMCG00021818 NA coding upstream 167855 30730655 ~ 30741775 (-)
AMCG00021819 NA coding upstream 204934 30767734 ~ 30768744 (-)
AMCG00021823 gdf6a coding upstream 438186 31000986 ~ 31028447 (-)
G88545 NA non-coding downstream 100194 30425304 ~ 30425552 (-)
G88435 NA non-coding downstream 578206 29888445 ~ 29947540 (-)
G88434 NA non-coding downstream 684207 29838518 ~ 29841539 (-)
G88347 NA non-coding downstream 1244873 29279361 ~ 29280873 (-)
G88245 NA non-coding downstream 1694522 28830158 ~ 28831224 (-)
G88643 NA non-coding upstream 398903 30961703 ~ 30962096 (-)
G88736 NA non-coding upstream 1235952 31798752 ~ 31836239 (-)
G88742 NA non-coding upstream 1296609 31859409 ~ 31859833 (-)
G88762 NA non-coding upstream 1425974 31988774 ~ 31989050 (-)
G88795 NA non-coding upstream 1531902 32094702 ~ 32094939 (-)
G88527 NA other downstream 101134 30337583 ~ 30424612 (-)
G88405 dtbp1,dtnbp1,LOC106596829,LOC106606149,LOC106596393 other downstream 782938 29730077 ~ 29742808 (-)
G88288 ctdp1,LOC107745039,LOC107698650,LOC107748359,LOC107672848 other downstream 1453986 29069201 ~ 29071760 (-)
G88242 LOC106595015,LOC106598893,LOC106597821 other downstream 1742465 28781802 ~ 28783281 (-)
AMCG00021723 hsf1 other downstream 3605902 26899963 ~ 26919844 (-)
AMCG00021820 NA other upstream 315048 30877848 ~ 30888588 (-)
AMCG00021830 eny2,LOC100694417,LOC103393926 other upstream 566783 31129583 ~ 31132185 (-)
AMCG00021849 NA other upstream 1500585 32063385 ~ 32069464 (-)
AMCG00021867 LOC107596751,LOC107685553,LOC107743232 other upstream 3697204 34260004 ~ 34356907 (-)
G89004 LOC107685553,LOC107596751,LOC107743232,LOC107662664,LOC108270036 other upstream 3784188 34346988 ~ 34380295 (-)

Expression


Co-expression Network