G88655


Basic Information

Item Value
gene id G88655
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 31047803 ~ 31048529 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU110644
AGAAGGCTGGTTAAAAGGAATATCCTGTGTGGCTGCTAGCCTGCTGGAGAATCCGGCACTACCATCAGACACAATGAAATTTAGTGGCTCCCTCTTCTTAAGGACAATctttttgtgttttcctgatGGTGGGGGTCATGTCTTTGAAATAGTCAGGCTCATCTGTCTCAGTGTCATTTTGTTGGGGGGTCACAGTACCATTCCCTCCTTCAATCTTAATACTTGTGGGGGCATCCTCATCCCAGGAACTCCATTCTTCTATCTCtggct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU110644 True 270 lncRNA 0.46 2 31047803 31048529

Neighbor

gene id symbol gene type direction distance location
AMCG00021821 NA coding upstream 8731 31028446 ~ 31039072 (+)
AMCG00021822 NA coding upstream 169963 30863262 ~ 30877840 (+)
AMCG00021824 plekhf2,LOC107666819,LOC107600513,LOC107668314 coding upstream 249814 30797240 ~ 30797989 (+)
AMCG00021814 LOC107600535 coding upstream 294539 30744604 ~ 30753264 (+)
AMCG00021815 ints8,LOC107563206 coding upstream 348439 30679836 ~ 30699364 (+)
AMCG00021825 pkhd1l1,LOC107656576 coding downstream 29655 31078184 ~ 31156314 (+)
AMCG00021832 NA coding downstream 205665 31254194 ~ 31255057 (+)
AMCG00021833 LOC103365770,LOC100694149,LOC101483159 coding downstream 321569 31370098 ~ 31404802 (+)
AMCG00021835 rspo2,LOC107679648,LOC107600624,LOC107755916,LOC107705839 coding downstream 370977 31419506 ~ 31445655 (+)
AMCG00021839 NA coding downstream 534512 31583041 ~ 31584257 (+)
G88609 NA non-coding upstream 316935 30727284 ~ 30730868 (+)
G88485 NA non-coding upstream 789606 30256024 ~ 30258197 (+)
G88452 NA non-coding upstream 828307 30142195 ~ 30219496 (+)
G88454 NA non-coding upstream 908519 30137538 ~ 30139284 (+)
G88450 NA non-coding upstream 998915 30047128 ~ 30048888 (+)
G88666 NA non-coding downstream 81818 31130347 ~ 31132235 (+)
G88677 LOC101154678 non-coding downstream 165780 31214309 ~ 31214669 (+)
G88741 NA non-coding downstream 810306 31858835 ~ 31859037 (+)
G88743 NA non-coding downstream 811392 31859921 ~ 31860135 (+)
G88746 NA non-coding downstream 845938 31894467 ~ 31986530 (+)
AMCG00021802 kdm1b other upstream 578883 30449957 ~ 30468920 (+)
AMCG00021803 clg22h6orf62,clg10h6orf62,c24h6orf62,LOC106515831,LOC101464686,LOC108240366,LOC104924567,LOC102228185,LOC103135136 other upstream 640031 30267402 ~ 30407772 (+)
AMCG00021779 LOC108438266,LOC105891906 other upstream 1662478 29378575 ~ 29385325 (+)
AMCG00021772 NA other upstream 1772456 29264827 ~ 29275347 (+)
G88276 NA other upstream 1982464 29060887 ~ 29065339 (+)
AMCG00021881 LOC107748698,LOC102792383,LOC101481807,LOC108256925,LOC106919167,LOC108434168 other downstream 3878024 34926553 ~ 35077090 (+)
G89142 NA other downstream 4162604 35211133 ~ 35263537 (+)
G89299 NA other downstream 4916042 35964571 ~ 35967384 (+)
AMCG00021900 NA other downstream 5601703 36650232 ~ 36659244 (+)
G89578 NA other downstream 7072728 38121257 ~ 38151049 (+)

Expression


Co-expression Network