G88742


Basic Information

Item Value
gene id G88742
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 31859409 ~ 31859833 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU110747
ttcccctctgcatttaaacaagctgctgtcaccccactcctcaagaaaccaacccttgacttcacctctcctcagaactaccgccctgtctccctactccccttcctctcaaagactcttgagcgggcggtccaccgtcagctctctgcttttctttcccaacactcactcctgcatcctctgcaatccggcttctgcacagctcacccCACTTAAACGACtgtcctggcagtcactgactcccttagctgtgctcgggcggcctccctctcctcagtcctcatcctccttgatctctctgcagcatttgacactgtcgatcactccatcctcctctcctgccttgttgaccttggaatctctgggactgctctcacctggttctcctcctacctcaacgaccggacctaccaagtgacatggcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU110747 True 425 lncRNA 0.56 1 31859409 31859833

Neighbor

gene id symbol gene type direction distance location
AMCG00021828 LOC107600623,LOC107666844,LOC107551188,LOC105905365,LOC107705775 coding downstream 509041 31310586 ~ 31350368 (-)
AMCG00021826 NA coding downstream 634028 31221983 ~ 31225381 (-)
AMCG00021831 NA coding downstream 750763 31093408 ~ 31108646 (-)
AMCG00021829 NA coding downstream 766039 31058059 ~ 31093370 (-)
AMCG00021827 ebag9,LOC107666870,LOC107705161,LOC107600620 coding downstream 808225 31042531 ~ 31051184 (-)
AMCG00021848 med30,LOC107706236,LOC107754270 coding upstream 151609 32011442 ~ 32018134 (-)
AMCG00021847 NA coding upstream 171855 32031688 ~ 32037579 (-)
AMCG00021846 NA coding upstream 187277 32047110 ~ 32047584 (-)
AMCG00021845 NA coding upstream 235692 32095525 ~ 32097519 (-)
AMCG00021861 NA coding upstream 2146826 34006659 ~ 34014890 (-)
G88736 NA non-coding downstream 23170 31798752 ~ 31836239 (-)
G88643 NA non-coding downstream 897313 30961703 ~ 30962096 (-)
G88562 NA non-coding downstream 1296609 30525746 ~ 30562800 (-)
G88545 NA non-coding downstream 1433857 30425304 ~ 30425552 (-)
G88435 NA non-coding downstream 1911869 29888445 ~ 29947540 (-)
G88762 NA non-coding upstream 128941 31988774 ~ 31989050 (-)
G88795 NA non-coding upstream 234869 32094702 ~ 32094939 (-)
G88831 NA non-coding upstream 832438 32692271 ~ 32692496 (-)
G88866 NA non-coding upstream 1810634 33670467 ~ 33670919 (-)
G88871 NA non-coding upstream 1900439 33760272 ~ 33760620 (-)
AMCG00021830 eny2,LOC100694417,LOC103393926 other downstream 727224 31129583 ~ 31132185 (-)
AMCG00021820 NA other downstream 970821 30877848 ~ 30888588 (-)
G88527 NA other downstream 1434797 30337583 ~ 30424612 (-)
G88405 dtbp1,dtnbp1,LOC106596829,LOC106606149,LOC106596393 other downstream 2116601 29730077 ~ 29742808 (-)
G88288 ctdp1,LOC107745039,LOC107698650,LOC107748359,LOC107672848 other downstream 2787649 29069201 ~ 29071760 (-)
AMCG00021849 NA other upstream 203552 32063385 ~ 32069464 (-)
AMCG00021867 LOC107596751,LOC107685553,LOC107743232 other upstream 2400171 34260004 ~ 34356907 (-)
G89004 LOC107685553,LOC107596751,LOC107743232,LOC107662664,LOC108270036 other upstream 2487155 34346988 ~ 34380295 (-)
AMCG00021868 slc6a19b,LOC108270036,LOC107596751,LOC107685553,LOC107743232,LOC106606020 other upstream 2518868 34378701 ~ 34388010 (-)
G89217 kif13a,LOC101479097,LOC102301062,LOC102786386 other upstream 3515183 35375016 ~ 35395771 (-)

Expression


Co-expression Network