G88771


Basic Information

Item Value
gene id G88771
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 32028958 ~ 32029166 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU110780
GGTAtgcaggggctgtgaaggactgcatgtgtcggctatagtatctgtgtatgtgacAAAGTCACGTGACTAGGCTGAATAGGGCTTCATTTCGTCATACTGTTTCGAAACGTTTCACATGTTAAGAAGCTTTTCCATTTGTAGAAGTGTCTGCCCTTCTTATCCCCGTCTATACCAGGTTGATGAAGGTTATTATAAAGAAAATCATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU110780 True 209 lncRNA 0.42 1 32028958 32029166

Neighbor

gene id symbol gene type direction distance location
AMCG00021840 LOC108430552,LOC106928852,LOC106964918 coding upstream 47930 31954587 ~ 31981028 (+)
AMCG00021841 LOC101464589,LOC102196503,LOC102793765,LOC106588504 coding upstream 157933 31870072 ~ 31871025 (+)
AMCG00021837 samd12,LOC107592942 coding upstream 265955 31755353 ~ 31763003 (+)
AMCG00021834 NA coding upstream 317881 31704641 ~ 31711077 (+)
AMCG00021838 angpt1,LOC106588502 coding upstream 352558 31673034 ~ 31676400 (+)
AMCG00021842 NA coding downstream 29950 32059116 ~ 32065047 (+)
AMCG00021843 rad21,LOC108243945 coding downstream 52968 32082134 ~ 32092685 (+)
AMCG00021850 NA coding downstream 109406 32138572 ~ 32146026 (+)
AMCG00021844 eif3h coding downstream 164111 32193277 ~ 32219473 (+)
AMCG00021851 NA coding downstream 389135 32418301 ~ 32433938 (+)
G88761 NA non-coding upstream 39907 31988784 ~ 31989051 (+)
G88746 NA non-coding upstream 42428 31894467 ~ 31986530 (+)
G88743 NA non-coding upstream 168823 31859921 ~ 31860135 (+)
G88741 NA non-coding upstream 169921 31858835 ~ 31859037 (+)
G88677 LOC101154678 non-coding upstream 814289 31214309 ~ 31214669 (+)
G88776 NA non-coding downstream 36117 32065283 ~ 32067407 (+)
G88833 NA non-coding downstream 776152 32805318 ~ 32805877 (+)
G88838 NA non-coding downstream 848233 32877399 ~ 32877672 (+)
G88867 NA non-coding downstream 1681608 33710774 ~ 33711053 (+)
G88872 NA non-coding downstream 1732077 33761243 ~ 33761474 (+)
AMCG00021802 kdm1b other upstream 1560038 30449957 ~ 30468920 (+)
AMCG00021803 clg22h6orf62,clg10h6orf62,c24h6orf62,LOC106515831,LOC101464686,LOC108240366,LOC104924567,LOC102228185,LOC103135136 other upstream 1621186 30267402 ~ 30407772 (+)
AMCG00021779 LOC108438266,LOC105891906 other upstream 2643633 29378575 ~ 29385325 (+)
AMCG00021772 NA other upstream 2753611 29264827 ~ 29275347 (+)
G88276 NA other upstream 2963619 29060887 ~ 29065339 (+)
AMCG00021881 LOC107748698,LOC102792383,LOC101481807,LOC108256925,LOC106919167,LOC108434168 other downstream 2897387 34926553 ~ 35077090 (+)
G89142 NA other downstream 3181967 35211133 ~ 35263537 (+)
G89299 NA other downstream 3935405 35964571 ~ 35967384 (+)
AMCG00021900 NA other downstream 4621066 36650232 ~ 36659244 (+)
G89578 NA other downstream 6092091 38121257 ~ 38151049 (+)

Expression


Co-expression Network