G88867


Basic Information

Item Value
gene id G88867
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 33710774 ~ 33711053 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU110886
CCCGAACAGCGCCTTCCAAACCGCAGGAGACACGTGTTCTGAAGGTAGGCCAAAGCAATGTGTTTAATGCCcagttttattcagatttcatGGTATGCCATAGAACAAGTTGTtacatattatgaattaattacatcttctaaaacataataatgtgtaaatttACGGgaccaatgtttgttttttgatttgacaGTTGTCAACAAGACCGTGTTTAACCCACATAATTACGcactcccccacccaccccaagTCACAGAGCAAACTTTGAATGGAggtg

Function

GO:

id name namespace
GO:0019825 oxygen binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU110886 True 280 lncRNA 0.40 1 33710774 33711053

Neighbor

gene id symbol gene type direction distance location
AMCG00021855 csmd3,LOC106570400 coding upstream 124274 33548596 ~ 33586500 (+)
AMCG00021856 csmd3 coding upstream 172864 33475168 ~ 33537910 (+)
AMCG00021854 csmd3 coding upstream 257121 33435316 ~ 33453653 (+)
AMCG00021857 csmd3 coding upstream 315549 33382419 ~ 33395225 (+)
AMCG00021853 NA coding upstream 410544 32995224 ~ 33300230 (+)
AMCG00021858 NA coding downstream 99421 33810474 ~ 33822086 (+)
AMCG00021859 clptm1l coding downstream 563613 34274666 ~ 34286319 (+)
AMCG00021862 NA coding downstream 593896 34304949 ~ 34323922 (+)
AMCG00021869 NA coding downstream 695796 34406849 ~ 34413209 (+)
AMCG00021876 fhod3,LOC108413044,LOC102209662,LOC102799816 coding downstream 885863 34596916 ~ 34607621 (+)
G88838 NA non-coding upstream 833102 32877399 ~ 32877672 (+)
G88833 NA non-coding upstream 904897 32805318 ~ 32805877 (+)
G88776 NA non-coding upstream 1643367 32065283 ~ 32067407 (+)
G88771 NA non-coding upstream 1681608 32028958 ~ 32029166 (+)
G88761 NA non-coding upstream 1721723 31988784 ~ 31989051 (+)
G88872 NA non-coding downstream 50190 33761243 ~ 33761474 (+)
G88882 NA non-coding downstream 134043 33845096 ~ 33845340 (+)
G88884 NA non-coding downstream 200367 33911420 ~ 33911775 (+)
G88887 NA non-coding downstream 247542 33958595 ~ 33959180 (+)
G88927 NA non-coding downstream 444368 34155421 ~ 34155966 (+)
AMCG00021802 kdm1b other upstream 3241854 30449957 ~ 30468920 (+)
AMCG00021803 clg22h6orf62,clg10h6orf62,c24h6orf62,LOC106515831,LOC101464686,LOC108240366,LOC104924567,LOC102228185,LOC103135136 other upstream 3303002 30267402 ~ 30407772 (+)
AMCG00021779 LOC108438266,LOC105891906 other upstream 4325449 29378575 ~ 29385325 (+)
AMCG00021772 NA other upstream 4435427 29264827 ~ 29275347 (+)
G88276 NA other upstream 4645435 29060887 ~ 29065339 (+)
AMCG00021881 LOC107748698,LOC102792383,LOC101481807,LOC108256925,LOC106919167,LOC108434168 other downstream 1215500 34926553 ~ 35077090 (+)
G89142 NA other downstream 1500080 35211133 ~ 35263537 (+)
G89299 NA other downstream 2253518 35964571 ~ 35967384 (+)
AMCG00021900 NA other downstream 2939179 36650232 ~ 36659244 (+)
G89578 NA other downstream 4410204 38121257 ~ 38151049 (+)

Expression


Co-expression Network