G88873


Basic Information

Item Value
gene id G88873
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 33761242 ~ 33761474 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU110892
TGCCTTTCCTAACCAGTCTTCTAGCTTCCAGAGTGGGTTAATAATGGAATAtgctcagaaaatgtttttgatccCTCAGGAGCAGcttgagaaactgagaaaaaatgttGTCGGGCCAGAGCCCATTAGACAAACGGCCGAAAACAACCtggactctgaaatgaaagctataTTGGCCAGGGCCGATTTAAATCAGTATTCCAAAGCCCAGTTGTATAGCAACACGTTACAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU110892 True 233 lncRNA 0.44 1 33761242 33761474

Neighbor

gene id symbol gene type direction distance location
AMCG00021845 NA coding downstream 1663723 32095525 ~ 32097519 (-)
AMCG00021846 NA coding downstream 1713658 32047110 ~ 32047584 (-)
AMCG00021847 NA coding downstream 1723663 32031688 ~ 32037579 (-)
AMCG00021848 med30,LOC107706236,LOC107754270 coding downstream 1743108 32011442 ~ 32018134 (-)
AMCG00021828 LOC107600623,LOC107666844,LOC107551188,LOC105905365,LOC107705775 coding downstream 2410874 31310586 ~ 31350368 (-)
AMCG00021861 NA coding upstream 245185 34006659 ~ 34014890 (-)
AMCG00021860 LOC107748562 coding upstream 418118 34179592 ~ 34189526 (-)
AMCG00021864 NA coding upstream 481391 34242865 ~ 34249647 (-)
AMCG00021865 NA coding upstream 490200 34251674 ~ 34260396 (-)
AMCG00021863 LOC107751906 coding upstream 502341 34263815 ~ 34274711 (-)
G88871 NA non-coding downstream 622 33760272 ~ 33760620 (-)
G88866 NA non-coding downstream 90323 33670467 ~ 33670919 (-)
G88831 NA non-coding downstream 1068746 32692271 ~ 32692496 (-)
G88795 NA non-coding downstream 1666303 32094702 ~ 32094939 (-)
G88762 NA non-coding downstream 1772192 31988774 ~ 31989050 (-)
G88883 NA non-coding upstream 83640 33845114 ~ 33845452 (-)
G88918 NA non-coding upstream 214606 33976080 ~ 33980828 (-)
G88939 NA non-coding upstream 415573 34177047 ~ 34177481 (-)
G88991 NA non-coding upstream 522910 34284384 ~ 34286302 (-)
G89003 NA non-coding upstream 583161 34344635 ~ 34345989 (-)
AMCG00021849 NA other downstream 1691778 32063385 ~ 32069464 (-)
AMCG00021830 eny2,LOC100694417,LOC103393926 other downstream 2629057 31129583 ~ 31132185 (-)
AMCG00021820 NA other downstream 2872654 30877848 ~ 30888588 (-)
G88527 NA other downstream 3336630 30337583 ~ 30424612 (-)
G88405 dtbp1,dtnbp1,LOC106596829,LOC106606149,LOC106596393 other downstream 4018434 29730077 ~ 29742808 (-)
AMCG00021867 LOC107596751,LOC107685553,LOC107743232 other upstream 498530 34260004 ~ 34356907 (-)
G89004 LOC107685553,LOC107596751,LOC107743232,LOC107662664,LOC108270036 other upstream 585514 34346988 ~ 34380295 (-)
AMCG00021868 slc6a19b,LOC108270036,LOC107596751,LOC107685553,LOC107743232,LOC106606020 other upstream 617227 34378701 ~ 34388010 (-)
G89217 kif13a,LOC101479097,LOC102301062,LOC102786386 other upstream 1613542 35375016 ~ 35395771 (-)
G89368 NA other upstream 2182278 35943752 ~ 35946984 (-)

Expression


Co-expression Network