G88939


Basic Information

Item Value
gene id G88939
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 34177047 ~ 34177481 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU110961
AGAGACATTTTCATTGGTAGGCAATGGATCTGGCAAATGCCACGGACCACAGTGTCTAGCAGCAAATTTAGCACACCGATCAGCTTCATCATTTCTGATATGATGTTCACCTCTACGATCCTTTCTCACATGGGCCTtaactttcaaaacagcaatttCGCCTGGTCTTGACTGAATAGAAGACCAAATATGCTGTAGTAAGGTAGTATGTTTCAAGGGACGATCATCTGATGATCGGAAATTATTTTTGGCATAGAGAGGTAGCAAGGTACATGCAGTAACAACATAAGCACTATCTGTATAAATATCTGCAGAATCATCAGTTATCCTAAGGGTTTCTAGCAAAGCTGCCAATTCAGAATATTGTGACGATTGTCCTGGACAAGAAAATTTTATAGTGTACTCGGggaacaaaactgcaaaacctGCTAGCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU110961 True 435 lncRNA 0.40 1 34177047 34177481

Neighbor

gene id symbol gene type direction distance location
AMCG00021861 NA coding downstream 162157 34006659 ~ 34014890 (-)
AMCG00021845 NA coding downstream 2079528 32095525 ~ 32097519 (-)
AMCG00021846 NA coding downstream 2129463 32047110 ~ 32047584 (-)
AMCG00021847 NA coding downstream 2139468 32031688 ~ 32037579 (-)
AMCG00021848 med30,LOC107706236,LOC107754270 coding downstream 2158913 32011442 ~ 32018134 (-)
AMCG00021860 LOC107748562 coding upstream 2111 34179592 ~ 34189526 (-)
AMCG00021864 NA coding upstream 65384 34242865 ~ 34249647 (-)
AMCG00021865 NA coding upstream 74193 34251674 ~ 34260396 (-)
AMCG00021863 LOC107751906 coding upstream 86334 34263815 ~ 34274711 (-)
AMCG00021866 NA coding upstream 149677 34327158 ~ 34348033 (-)
G88918 NA non-coding downstream 196219 33976080 ~ 33980828 (-)
G88883 NA non-coding downstream 331595 33845114 ~ 33845452 (-)
G88873 NA non-coding downstream 415573 33761242 ~ 33761474 (-)
G88871 NA non-coding downstream 416427 33760272 ~ 33760620 (-)
G88866 NA non-coding downstream 506128 33670467 ~ 33670919 (-)
G88991 NA non-coding upstream 106903 34284384 ~ 34286302 (-)
G89003 NA non-coding upstream 167154 34344635 ~ 34345989 (-)
G89011 NA non-coding upstream 242279 34419760 ~ 34420279 (-)
G89130 NA non-coding upstream 902092 35079573 ~ 35081173 (-)
G89212 NA non-coding upstream 1192625 35370106 ~ 35370480 (-)
AMCG00021849 NA other downstream 2107583 32063385 ~ 32069464 (-)
AMCG00021830 eny2,LOC100694417,LOC103393926 other downstream 3044862 31129583 ~ 31132185 (-)
AMCG00021820 NA other downstream 3288459 30877848 ~ 30888588 (-)
G88527 NA other downstream 3752435 30337583 ~ 30424612 (-)
G88405 dtbp1,dtnbp1,LOC106596829,LOC106606149,LOC106596393 other downstream 4434239 29730077 ~ 29742808 (-)
AMCG00021867 LOC107596751,LOC107685553,LOC107743232 other upstream 82523 34260004 ~ 34356907 (-)
G89004 LOC107685553,LOC107596751,LOC107743232,LOC107662664,LOC108270036 other upstream 169507 34346988 ~ 34380295 (-)
AMCG00021868 slc6a19b,LOC108270036,LOC107596751,LOC107685553,LOC107743232,LOC106606020 other upstream 201220 34378701 ~ 34388010 (-)
G89217 kif13a,LOC101479097,LOC102301062,LOC102786386 other upstream 1197535 35375016 ~ 35395771 (-)
G89368 NA other upstream 1766271 35943752 ~ 35946984 (-)

Expression


Co-expression Network