G89011


Basic Information

Item Value
gene id G89011
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 34419760 ~ 34420279 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU111049
taagaacataagaaagtttacaaacgagaggaggccattcgacccatcgtgctcgtttggtgaccattaatatctaagtgatccaaggatcctatccagtctatttttaaatgttcccaaactttcagcttctaccacatcgctgggtagtttattccagattgtgactactatCTGTGtaaaaaagtgtctcctgttttccaatttgaataccttgaagcccaatttccatttgtgtccccgggtgcgtgtgtccctgctgatctggaaaagctcctctggtttgatgtggtcgatgcctttcatgattttgaagacttggatcaagtccccacgtagtctcctctgttccagggtgaaaaggttcagttccctcagtctctccgagtaggactttcccttcagacctggaataagtctggttgctctcctctgaactgcctctagagcagcaatatccttcttgaagtgtggtgcccagaactgcacacagtattccagataaGATCTAACTAGCGct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111049 True 520 lncRNA 0.45 1 34419760 34420279

Neighbor

gene id symbol gene type direction distance location
AMCG00021866 NA coding downstream 71727 34327158 ~ 34348033 (-)
AMCG00021863 LOC107751906 coding downstream 145049 34263815 ~ 34274711 (-)
AMCG00021865 NA coding downstream 159364 34251674 ~ 34260396 (-)
AMCG00021864 NA coding downstream 170113 34242865 ~ 34249647 (-)
AMCG00021860 LOC107748562 coding downstream 230234 34179592 ~ 34189526 (-)
AMCG00021870 NA coding upstream 325424 34745703 ~ 34757627 (-)
AMCG00021878 grina coding upstream 346573 34766852 ~ 34784712 (-)
AMCG00021879 NA coding upstream 369989 34790268 ~ 34809602 (-)
AMCG00021877 vps28,LOC107696523,LOC107592928 coding upstream 390877 34811156 ~ 34820379 (-)
AMCG00021885 kif13a coding upstream 891010 35311289 ~ 35351633 (-)
G89003 NA non-coding downstream 73771 34344635 ~ 34345989 (-)
G88991 NA non-coding downstream 133458 34284384 ~ 34286302 (-)
G88939 NA non-coding downstream 242279 34177047 ~ 34177481 (-)
G88918 NA non-coding downstream 438932 33976080 ~ 33980828 (-)
G88883 NA non-coding downstream 574308 33845114 ~ 33845452 (-)
G89130 NA non-coding upstream 659294 35079573 ~ 35081173 (-)
G89212 NA non-coding upstream 949827 35370106 ~ 35370480 (-)
G89240 NA non-coding upstream 984778 35405057 ~ 35405340 (-)
G89247 NA non-coding upstream 1034288 35454567 ~ 35455198 (-)
G89264 NA non-coding upstream 1291184 35711463 ~ 35711716 (-)
AMCG00021868 slc6a19b,LOC108270036,LOC107596751,LOC107685553,LOC107743232,LOC106606020 other downstream 31750 34378701 ~ 34388010 (-)
G89004 LOC107685553,LOC107596751,LOC107743232,LOC107662664,LOC108270036 other downstream 39465 34346988 ~ 34380295 (-)
AMCG00021867 LOC107596751,LOC107685553,LOC107743232 other downstream 62853 34260004 ~ 34356907 (-)
AMCG00021849 NA other downstream 2350296 32063385 ~ 32069464 (-)
AMCG00021830 eny2,LOC100694417,LOC103393926 other downstream 3287575 31129583 ~ 31132185 (-)
G89217 kif13a,LOC101479097,LOC102301062,LOC102786386 other upstream 954737 35375016 ~ 35395771 (-)
G89368 NA other upstream 1523473 35943752 ~ 35946984 (-)
AMCG00021895 LOC102226217,LOC106946249,LOC103472391,LOC107092461,LOC103135126,LOC106918615,LOC105905342,LOC104924555,LOC108426791,LOC100705487 other upstream 1994600 36414879 ~ 36438350 (-)
AMCG00021896 tmem170b,LOC107734028,LOC107669975 other upstream 2104230 36524509 ~ 36537718 (-)
AMCG00021897 smim13,si:dkey-206d17.5,LOC107559689,LOC107551766 other upstream 2256827 36677106 ~ 36687642 (-)

Expression


Co-expression Network