G89130


Basic Information

Item Value
gene id G89130
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 35079573 ~ 35081173 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU111206
TCTGTTTTTATAGCACATTGGTTTATTTACATTAGAATATAGTGTTATCCTCAAAAAATAcaccagattttatttttttaaaccatgccTCATAACacaactttcatttttattagcAAAATCAACCAGTTAGTTCTGATGAATTATGTCGTTCTAATATTTTAAACCGGCTTAAacggaacaaaacaaaacaaaactgctttcGATGAGTGGATACATGTttttgtatatagttcattacTTGAGTTAGTAAAACATGcgaagcaaaaaatatatattatatatatatatatcaaaaatatgatgaaaaaaatgaaaatatcatgATGATTTACACAAGTCAAGTACTTTTTTAAGGTACAACAGAATACAAATGACAAACTTATTGCTATGTTGAACAAAAAAGGGGTTGGGAACACTGGTTAAAAAAGGCAACATGAAGCAAAGTTTTAAGATCCCTTTCCAAAGAGAGGTGACTAAATAGAGTATGTACATGGGACTTAGATGCGttagatttaaattatatattttttgactatcaaatactttttagtGTTCTTGACATAGATAAACTACCTTTGCACCCAATCAGTTTTCAATGTAACCAAGCTGAAAGTGTCTCATAAAAAACTGCCATAAAATAGGAATTCAGGGAACAATAAAGGggcatttataattataattaaaacgtCTTTGTGAAGGATGAAGCACAGTTGGCCCTATTCCTCAATAACTGGTTAAGAGGAGCAAACAGAAAGCAATGGGTCCTCTTGTCTGACAATATTGTTCATTAGACATGAGAGCAAGATCTGTTGCTTCTCAGATTGCTTTCAActcaacaaaacattttgagatTGATGAGCTCCTACTCTTGCAGCTGCTTTCAGTCCTTTTTAAGACTTCACATAAGAATGTGAACAGTGGATCAAGATATTCTATACTTTTATTTGTTAACTCATTTGTAACTGTCAAATACATCTTGTCTATACAATAGCGTAATCTGAAATGACCTGAAAAAACATACTGTAACCATGCCTCATAAATTATGTTGATAAGGCAATACTGCAACCGAGGCATCCTGATTTTTAAGTTTGATACTAAATAACACTGACCCAAACTACCATCTCCAATGGGTTCTCCTCTGAATTTGATAAACACTAtccaattataattattcataaGTATTTTAACTTAAATGGACTTGTCCTGTAGCCCATGTCTTCCAGTgtctgaaaacatatttttgtgtaGCACCTATtgttcatttcaatttcaatttacaatACAGAGTAAAAATGACATTGATGGACAATAGAAGGCAGCAGCTGTGGACTGTCCAGTGAGAGAATGCAGCTCCAGGAGTGAAGGCTTGTAGAAATTGTCTCAGTGTACAGTGTCTACAATAAGCTTATTCCTGATATCTCAGAGCATAAAGAGATTTCAAAGGTTCAATAGCCTCAGTTTTCTTCACGAGGGGGAGGTGTgatgggaggaggagggaaataCTTGAATGTagatctaaaaacaaaacaaaaagaatgactgaattaatgaaatgaactgaataaaatgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111206 True 1575 lncRNA 0.33 2 35079573 35081173

Neighbor

gene id symbol gene type direction distance location
AMCG00021877 vps28,LOC107696523,LOC107592928 coding downstream 259194 34811156 ~ 34820379 (-)
AMCG00021879 NA coding downstream 269971 34790268 ~ 34809602 (-)
AMCG00021878 grina coding downstream 294861 34766852 ~ 34784712 (-)
AMCG00021870 NA coding downstream 321946 34745703 ~ 34757627 (-)
AMCG00021866 NA coding downstream 731540 34327158 ~ 34348033 (-)
AMCG00021885 kif13a coding upstream 230116 35311289 ~ 35351633 (-)
AMCG00021889 NA coding upstream 587131 35668304 ~ 35672523 (-)
AMCG00021888 NA coding upstream 646246 35727419 ~ 35740510 (-)
AMCG00021890 NA coding upstream 717017 35798190 ~ 35799107 (-)
AMCG00021887 trip13,LOC106596102,LOC106590995 coding upstream 847418 35928591 ~ 35950291 (-)
G89011 NA non-coding downstream 659294 34419760 ~ 34420279 (-)
G89003 NA non-coding downstream 733584 34344635 ~ 34345989 (-)
G88991 NA non-coding downstream 793271 34284384 ~ 34286302 (-)
G88939 NA non-coding downstream 902092 34177047 ~ 34177481 (-)
G88918 NA non-coding downstream 1098745 33976080 ~ 33980828 (-)
G89212 NA non-coding upstream 288933 35370106 ~ 35370480 (-)
G89240 NA non-coding upstream 323884 35405057 ~ 35405340 (-)
G89247 NA non-coding upstream 373394 35454567 ~ 35455198 (-)
G89264 NA non-coding upstream 630290 35711463 ~ 35711716 (-)
G89272 LOC101154678 non-coding upstream 736193 35817366 ~ 35817621 (-)
AMCG00021868 slc6a19b,LOC108270036,LOC107596751,LOC107685553,LOC107743232,LOC106606020 other downstream 691563 34378701 ~ 34388010 (-)
G89004 LOC107685553,LOC107596751,LOC107743232,LOC107662664,LOC108270036 other downstream 699278 34346988 ~ 34380295 (-)
AMCG00021867 LOC107596751,LOC107685553,LOC107743232 other downstream 722666 34260004 ~ 34356907 (-)
AMCG00021849 NA other downstream 3010109 32063385 ~ 32069464 (-)
AMCG00021830 eny2,LOC100694417,LOC103393926 other downstream 3947388 31129583 ~ 31132185 (-)
G89217 kif13a,LOC101479097,LOC102301062,LOC102786386 other upstream 293843 35375016 ~ 35395771 (-)
G89368 NA other upstream 862579 35943752 ~ 35946984 (-)
AMCG00021895 LOC102226217,LOC106946249,LOC103472391,LOC107092461,LOC103135126,LOC106918615,LOC105905342,LOC104924555,LOC108426791,LOC100705487 other upstream 1333706 36414879 ~ 36438350 (-)
AMCG00021896 tmem170b,LOC107734028,LOC107669975 other upstream 1443336 36524509 ~ 36537718 (-)
AMCG00021897 smim13,si:dkey-206d17.5,LOC107559689,LOC107551766 other upstream 1595933 36677106 ~ 36687642 (-)

Expression


Co-expression Network