G89285


Basic Information

Item Value
gene id G89285
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 35900643 ~ 35901176 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU111393
GTCTTCTGtgacgtcctcaaggaccaaaggaaaggatccaagtgcaggctttagAGTTGAAGCAAAAAAccgataagggcaaaacgagagagcataaacagggacagtccaggtcaatcgatcaagcaaacaggctagtagggagatccgaaaggggtaaacgagagagggaagCAAAGaagctaggaaacagaggggtttaaatactgtgtagcaaagagggtttgaactaggtgaatgaatgactaaccaatgacaggagaggaggacagaacaggtgcacctggaaggaaagaatgtggaagaactggttgaactggacaaaggaaaggagaagcactagagtTAGTAttcaggagagggagacctctggtggtgaactaaggtagaaacaggggagaccgtgacactCACTGCATGTCAGTGAGATGCATGACACAAGATTTAACAGTTTTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111393 True 457 lncRNA 0.46 2 35900643 35901176

Neighbor

gene id symbol gene type direction distance location
AMCG00021894 NA coding upstream 13390 35864749 ~ 35887253 (+)
AMCG00021886 NA coding upstream 307305 35579959 ~ 35593338 (+)
AMCG00021884 NA coding upstream 682512 35200245 ~ 35218131 (+)
AMCG00021880 NA coding upstream 724875 35108615 ~ 35175768 (+)
AMCG00021882 NA coding upstream 814139 35077101 ~ 35086504 (+)
AMCG00021893 NA coding downstream 82879 35984055 ~ 36013655 (+)
AMCG00021899 LOC108426911,LOC108257397,LOC107601986,LOC107707114,LOC107677659,LOC107591967 coding downstream 564610 36465786 ~ 36501828 (+)
AMCG00021911 NA coding downstream 2219148 38120324 ~ 38121572 (+)
AMCG00021910 NA coding downstream 2235946 38137122 ~ 38142159 (+)
AMCG00021912 NA coding downstream 2494630 38395806 ~ 38397674 (+)
G89283 NA non-coding upstream 6781 35892163 ~ 35893862 (+)
G89222 NA non-coding upstream 493659 35406710 ~ 35406984 (+)
G89010 NA non-coding upstream 1480586 34419791 ~ 34420057 (+)
G89006 NA non-coding upstream 1512971 34387254 ~ 34387672 (+)
G88981 slc6a19b,LOC106570715,LOC107596751,LOC107743232,LOC107685553,LOC107662664 non-coding upstream 1514441 34383959 ~ 34386202 (+)
G89298 NA non-coding downstream 62582 35963758 ~ 35970466 (+)
G89329 NA non-coding downstream 345883 36247059 ~ 36248421 (+)
G89342 NA non-coding downstream 513468 36414644 ~ 36415841 (+)
G89430 NA non-coding downstream 610013 36511189 ~ 36511500 (+)
G89443 NA non-coding downstream 660831 36562007 ~ 36562413 (+)
G89142 NA other upstream 637106 35211133 ~ 35263537 (+)
AMCG00021881 LOC107748698,LOC102792383,LOC101481807,LOC108256925,LOC106919167,LOC108434168 other upstream 823553 34926553 ~ 35077090 (+)
AMCG00021802 kdm1b other upstream 5431723 30449957 ~ 30468920 (+)
AMCG00021803 clg22h6orf62,clg10h6orf62,c24h6orf62,LOC106515831,LOC101464686,LOC108240366,LOC104924567,LOC102228185,LOC103135136 other upstream 5492871 30267402 ~ 30407772 (+)
AMCG00021779 LOC108438266,LOC105891906 other upstream 6515318 29378575 ~ 29385325 (+)
G89299 NA other downstream 63395 35964571 ~ 35967384 (+)
AMCG00021900 NA other downstream 749056 36650232 ~ 36659244 (+)
G89578 NA other downstream 2220081 38121257 ~ 38151049 (+)
G89632 NA other downstream 2916696 38817872 ~ 38822685 (+)
G89728 NA other downstream 3499348 39400524 ~ 39408261 (+)

Expression


Co-expression Network