G89299


Basic Information

Item Value
gene id G89299
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 35964571 ~ 35967384 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU111415
GTGTATGGTTGTTTGGGCTGTTATGATAGCGTAGTGTTAATAGCAGCCACATAAGCAGCAAAGAAAAtcttatacatttgaaatgggaaaaaaacacaaaaagcacaagtCTGAATGGAGAACTGTTGATGattatgAAGACAAACCATTGGATAAACCTCTAAAACTCGTTCTGAAAGTTGGGGGAAGTGAGATCACTGAACTCTCAGGCTCCGGACATGACTCTAGCTACTACGATGACCGATCAGACCATGAGCGGGAACGCCACAAagacaagaagaaaaagaagaaaaagaaatctgaaaaggagaaagaaaagcatatgGATGatgaggagaggaggagaaggaaggtGAGCAATGAATGCCACAATCTGCAATACCATTTAAGCTTACTTGC
>TU111425
GTGTATGGTTGTTTGGGCTGTTATGATAGCGTAGTGTTAATAGCAGCCACATAAGCAGCAAAGAAAAtcttatacatttgaaatgggaaaaaaacacaaaaagcacaagtCTGAATGGAGAACTGTTGATGAGAAACCACGGTTTTTAAGATTGCTAAAGAAAAACTGCTCATCAGGAgattatgAAGACAAACCATTGGATAAACCTCTAAAACTCGTTCTGAAAGTTGGGGGAAGTGAGATCACTGAACTCTCAGGCTCCGGACATGACTCTAGCTACTACGATGACCGATCAGACCATGAGCGGGAACGCCACAAagacaagaagaaaaagaagaaaaagaaatctgaaaaggagaaagaaaagcatatgGATGatgaggagaggaggagaaggaaggtGAGCAATGAATGCCACAATCTGCAATACCATTTAAGCTTACTTGC

Function

GO:

id name namespace
GO:0000910 cytokinesis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111415 False 399 TUCP 0.41 2 35964571 35967384
TU111425 True 447 TUCP 0.40 3 35964571 35967384

Neighbor

gene id symbol gene type direction distance location
AMCG00021894 NA coding upstream 77318 35864749 ~ 35887253 (+)
AMCG00021886 NA coding upstream 371233 35579959 ~ 35593338 (+)
AMCG00021884 NA coding upstream 746440 35200245 ~ 35218131 (+)
AMCG00021880 NA coding upstream 788803 35108615 ~ 35175768 (+)
AMCG00021882 NA coding upstream 878067 35077101 ~ 35086504 (+)
AMCG00021893 NA coding downstream 16671 35984055 ~ 36013655 (+)
AMCG00021899 LOC108426911,LOC108257397,LOC107601986,LOC107707114,LOC107677659,LOC107591967 coding downstream 498402 36465786 ~ 36501828 (+)
AMCG00021911 NA coding downstream 2152940 38120324 ~ 38121572 (+)
AMCG00021910 NA coding downstream 2169738 38137122 ~ 38142159 (+)
AMCG00021912 NA coding downstream 2428422 38395806 ~ 38397674 (+)
G89285 NA non-coding upstream 63395 35900643 ~ 35901176 (+)
G89283 NA non-coding upstream 70709 35892163 ~ 35893862 (+)
G89222 NA non-coding upstream 557587 35406710 ~ 35406984 (+)
G89010 NA non-coding upstream 1544514 34419791 ~ 34420057 (+)
G89006 NA non-coding upstream 1576899 34387254 ~ 34387672 (+)
G89329 NA non-coding downstream 279675 36247059 ~ 36248421 (+)
G89342 NA non-coding downstream 447260 36414644 ~ 36415841 (+)
G89430 NA non-coding downstream 543805 36511189 ~ 36511500 (+)
G89443 NA non-coding downstream 594623 36562007 ~ 36562413 (+)
G89448 NA non-coding downstream 628335 36595719 ~ 36615546 (+)
G89142 NA other upstream 701034 35211133 ~ 35263537 (+)
AMCG00021881 LOC107748698,LOC102792383,LOC101481807,LOC108256925,LOC106919167,LOC108434168 other upstream 887481 34926553 ~ 35077090 (+)
AMCG00021802 kdm1b other upstream 5495651 30449957 ~ 30468920 (+)
AMCG00021803 clg22h6orf62,clg10h6orf62,c24h6orf62,LOC106515831,LOC101464686,LOC108240366,LOC104924567,LOC102228185,LOC103135136 other upstream 5556799 30267402 ~ 30407772 (+)
AMCG00021779 LOC108438266,LOC105891906 other upstream 6579246 29378575 ~ 29385325 (+)
AMCG00021900 NA other downstream 682848 36650232 ~ 36659244 (+)
G89578 NA other downstream 2153873 38121257 ~ 38151049 (+)
G89632 NA other downstream 2850488 38817872 ~ 38822685 (+)
G89728 NA other downstream 3433140 39400524 ~ 39408261 (+)

Expression


Co-expression Network