G89368


Basic Information

Item Value
gene id G89368
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 35943752 ~ 35946984 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU111504
GATCtagagtgaattttaattagtttttccatttttgtataattagtgtagtgcaacatttagtctttgtttttaatacatttgacaatgtatatctttggaattggtgtctgcgtccaattattacagaaattgagttctacaagattccaggattcgtgataaggtgacactataaattcacttctttaattgaaatgtataagtgtaccttacgctacacttgtctgtgattggctaaaaCAGAACGTACCTTTGCTAAGTTTGTGTAGTGGGGATTTCAGcatttctgcacagatctgctcggctccaccaatggaatcAGTGTAATTCTACAGATCTGTGCATTCCTGCGGAAATGTGCGCAACAAGAACAGGACCAATGGCTTCGTCACAgagaagttctgcatggaaatactttacTTTGACAGAGTAAATTAAATTTATAAACGGATGACAATATCGGGAAACTAATACGAAAGTCTGACATGAGATGCGTGAGAGTTGGCAGGTCTGCTTATTGCTACTGTTATATAATTTCCATATGTCTTCTAATACTAtatatatatataaactacttACCCTCTTCTTTACTTCCATGACCGACCTGTTGCATCCCCCAACTGCATTGGGGGATGCTGTGACTGACGCTGTGTCAGTCACAGACACCCATGCTCTCTCCCGGGTCGCTTCAGCTGTCCTACGGTTGCACAGGATATTATTTGGGCAGCATACTGCTCAGTCAGCTCCTCCCTATGTAAATTAAGGCCTCCTCCGGCCAGCACTGCTGCTTTGTTGTGTGTCTTCCATGTCTGTAGGATTACTGAAGGTCCATACAAAGTAAGGTATATAGTCACAGGTATGATATAGGCCAGGGTTATTCAATTATATTCTTACAGGGGCAAGATTTGAAAAACTCTTCAAAAGACCAGTATAAAGAACAGTGCAAATGCATGTATAAGCATACAATGCACCTTTATTCCTATATTACACTTTCTACAGAAATTCACATGCAGTCATGAAGATTTACATTTGACAAGGAGGGatgagtgtttgttttttatggcGTTCATGTGAGAGAAGCTGGAGTCACatgtttgttaaacaaaatatcgTCAAAAGAATAAAGGCCAAAGATCTCGTTTGGGAATTGCTCTCTGCGATAATATGCTCAGTCCAAGACTTCACACAACCCACAGACTGAAATACATGCCTCAGATCAGCCGATACCTGCATGTTCACTAGCTCCAACTGGAGGGAACCCTCATCGAGTGGCATCAGTGTCTGTTTAGCTTTTGCGGAGATGTCCTATCAGTAGAGAACGGGTCGCTAACGAACTGCATTACCACTGTTGGCAGATTAAACTTAGTTCTCTAAAAACTCCCAACATTAAGGGAGTGATTTGTGTTGATGAGAATTGGATATAGTTGCATGGTGTAGGGGAATGGAGCATTTTATTTGGGCACAGATCAGAATTGAAGGTaacaaatttattttgaaaagcagtcAGTTTTCGTGTCAATAACTGTTTTATCCCTCCCCTGTAGTGCCAAATTAAGTCCATTCAAGTGAATGAAGATGTCATTCAAAAAATACACCTCTGCTATGAACTCCTCATCAAGTGTTTTTGCTAGATACATGGGTGTCAAATCATGGACAGAAATATGGATTTCCTTCCTTGTGATATTTTTGTCAGGGTTTGAATTGCTACATGcgtaattttgttttgtgtttttcattttgttttgtttttcaacaattttCGTCTGTCAGTGGATTGCCCTCAAATAGATTCCTAGAAAGTTAGACTCCCCCAGCATGCTTTGGATATTGCACGAGCCTCTGTGAAAAGGGATTTTGTCATTATTCACTCCTAAAGCCTTGAGACCACAAAGTATAGTGTTTACTCTGACAACTACAGAAAGCAGGGGGTGCAGTTAATTAATAGTCATTACTTTCACTTCAAGCAGTGGTCTCAAAATAacttatacaaataatatatacaccgatcagccataacattatgaccactgacaggtgaagtgaataacaccaatattcttgttatcatggcacctgtcagtgggtgggatatataggaagcaagtgaacattttgtcctcaaagttgatgtgttaaaagcaggaaaaatgggcaagcgtaaggatctgagcgacttttacaagggtcaaattgtgggatgttcccggtctgcagtggtcagtacctatcaaaagtggtccaaggaaggaaaagcagtgaaccgggcacagggtcatgggcggccaaggctcattgatgcacgtggggagcgaaggctgacccgtgtggtccgatccaacagacaagatactggtagctcaaattgctgaaaaagttaatgctggttctgatagaaaggtgtcagaacacacagtgcttcgcagtttgttgcgtatggggctgcgtagctgcagaccagtcagggtgcccatgctgacccctgtccattGCCGAAAgagcctacaatgggcacgtgagcatcagaactggaccacggagcaatggaagaaggtggcctggtcagatgaatcacaagttcagggtgttgacttggtctccaaattccccatatctcaatccaatcaagcatctgtgggatgtgctggtcaaacaagtccgatccatggaggccccacctcgcaacttacaggacttaaaggatctgctgctaacgtcttggtgccagataccacagaaCACcgtcagaggtctagtggagtccatgccttgacgggtcagagctgttttggtggcaaaagggggacctacacaatattaggcaggtgatcataatgttatggctgattggtgtatttatctatttaatttattcagtatttttttttttaattgtggcaAAATAATGTTGTATATAAGGGAAATGgagtatttaacaaatactgaaaccaccccaCATAGCTCCACTTCGGTTGAAGGAAGAATATTTACgtgtaattcaaaaagatgccACAAAGAGCAGTTCattcacacaatagaatacaattcaTAAATAGGTCAGATAGAAGGAGCAGACAATAAGattaaaaactgctttttgtctggcttttgcaatttaaaagtacatatcTCTGCGTATGTTAATTTCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111504 True 3151 TUCP 0.41 2 35943752 35946984

Neighbor

gene id symbol gene type direction distance location
AMCG00021890 NA coding downstream 144645 35798190 ~ 35799107 (-)
AMCG00021888 NA coding downstream 203242 35727419 ~ 35740510 (-)
AMCG00021889 NA coding downstream 271229 35668304 ~ 35672523 (-)
AMCG00021885 kif13a coding downstream 592119 35311289 ~ 35351633 (-)
AMCG00021877 vps28,LOC107696523,LOC107592928 coding downstream 1123373 34811156 ~ 34820379 (-)
AMCG00021891 NA coding upstream 80296 36027280 ~ 36030435 (-)
AMCG00021892 plekhg4b,LOC107729807 coding upstream 107990 36054974 ~ 36058550 (-)
AMCG00021898 NA coding upstream 675547 36622531 ~ 36625236 (-)
AMCG00021902 LOC108435486,LOC106605067 coding upstream 889444 36836428 ~ 36845633 (-)
AMCG00021901 NA coding upstream 920859 36867843 ~ 36874210 (-)
G89359 NA non-coding downstream 50038 35852036 ~ 35893714 (-)
G89272 LOC101154678 non-coding downstream 126131 35817366 ~ 35817621 (-)
G89264 NA non-coding downstream 232036 35711463 ~ 35711716 (-)
G89247 NA non-coding downstream 488554 35454567 ~ 35455198 (-)
G89240 NA non-coding downstream 538412 35405057 ~ 35405340 (-)
G89373 NA non-coding upstream 20135 35967119 ~ 35985261 (-)
G89428 NA non-coding upstream 551210 36498194 ~ 36501828 (-)
G89431 NA non-coding upstream 564615 36511599 ~ 36511931 (-)
G89539 NA non-coding upstream 1311559 37258543 ~ 37258818 (-)
G89549 NA non-coding upstream 1519797 37466781 ~ 37467591 (-)
G89217 kif13a,LOC101479097,LOC102301062,LOC102786386 other downstream 547981 35375016 ~ 35395771 (-)
AMCG00021868 slc6a19b,LOC108270036,LOC107596751,LOC107685553,LOC107743232,LOC106606020 other downstream 1555742 34378701 ~ 34388010 (-)
G89004 LOC107685553,LOC107596751,LOC107743232,LOC107662664,LOC108270036 other downstream 1563457 34346988 ~ 34380295 (-)
AMCG00021867 LOC107596751,LOC107685553,LOC107743232 other downstream 1586845 34260004 ~ 34356907 (-)
AMCG00021849 NA other downstream 3874288 32063385 ~ 32069464 (-)
AMCG00021895 LOC102226217,LOC106946249,LOC103472391,LOC107092461,LOC103135126,LOC106918615,LOC105905342,LOC104924555,LOC108426791,LOC100705487 other upstream 467895 36414879 ~ 36438350 (-)
AMCG00021896 tmem170b,LOC107734028,LOC107669975 other upstream 577525 36524509 ~ 36537718 (-)
AMCG00021897 smim13,si:dkey-206d17.5,LOC107559689,LOC107551766 other upstream 730122 36677106 ~ 36687642 (-)
G89598 NA other upstream 2314403 38261387 ~ 38283855 (-)
G89611 NA other upstream 2448587 38395571 ~ 38397755 (-)

Expression


Co-expression Network