Gene
RNA
| Item | Value |
|---|---|
| gene id | G89527 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030130.1 |
| NCBI id | CM030130.1 |
| chromosome length | 39556810 |
| location | 37117552 ~ 37208252 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU111691 | False | 299 | lncRNA | 0.42 | 2 | 37117552 | 37121582 |
| TU111692 | True | 312 | lncRNA | 0.42 | 2 | 37117552 | 37208252 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00021899 | LOC108426911,LOC108257397,LOC107601986,LOC107707114,LOC107677659,LOC107591967 | coding | upstream | 615724 | 36465786 ~ 36501828 (+) |
| AMCG00021893 | NA | coding | upstream | 1103897 | 35984055 ~ 36013655 (+) |
| AMCG00021894 | NA | coding | upstream | 1230299 | 35864749 ~ 35887253 (+) |
| AMCG00021886 | NA | coding | upstream | 1524214 | 35579959 ~ 35593338 (+) |
| AMCG00021884 | NA | coding | upstream | 1899421 | 35200245 ~ 35218131 (+) |
| AMCG00021911 | NA | coding | downstream | 912072 | 38120324 ~ 38121572 (+) |
| AMCG00021910 | NA | coding | downstream | 928870 | 38137122 ~ 38142159 (+) |
| AMCG00021912 | NA | coding | downstream | 1187554 | 38395806 ~ 38397674 (+) |
| AMCG00021914 | NA | coding | downstream | 1647574 | 38855826 ~ 38865619 (+) |
| AMCG00021915 | NA | coding | downstream | 2150466 | 39358718 ~ 39369622 (+) |
| G89516 | atp9b,LOC104955405 | non-coding | upstream | 107010 | 37008474 ~ 37010542 (+) |
| G89480 | NA | non-coding | upstream | 262161 | 36848010 ~ 36855391 (+) |
| G89465 | NA | non-coding | upstream | 392161 | 36724112 ~ 36725391 (+) |
| G89448 | NA | non-coding | upstream | 502006 | 36595719 ~ 36615546 (+) |
| G89443 | NA | non-coding | upstream | 555139 | 36562007 ~ 36562413 (+) |
| G89538 | NA | non-coding | downstream | 50309 | 37258561 ~ 37258835 (+) |
| G89552 | NA | non-coding | downstream | 356722 | 37564974 ~ 37565215 (+) |
| G89554 | NA | non-coding | downstream | 394185 | 37602437 ~ 37602664 (+) |
| G89571 | NA | non-coding | downstream | 809052 | 38017304 ~ 38059534 (+) |
| G89583 | NA | non-coding | downstream | 946583 | 38154835 ~ 38155132 (+) |
| AMCG00021900 | NA | other | upstream | 458308 | 36650232 ~ 36659244 (+) |
| G89299 | NA | other | upstream | 1150168 | 35964571 ~ 35967384 (+) |
| G89142 | NA | other | upstream | 1854015 | 35211133 ~ 35263537 (+) |
| AMCG00021881 | LOC107748698,LOC102792383,LOC101481807,LOC108256925,LOC106919167,LOC108434168 | other | upstream | 2040462 | 34926553 ~ 35077090 (+) |
| AMCG00021802 | kdm1b | other | upstream | 6648632 | 30449957 ~ 30468920 (+) |
| G89578 | NA | other | downstream | 913005 | 38121257 ~ 38151049 (+) |
| G89632 | NA | other | downstream | 1609620 | 38817872 ~ 38822685 (+) |
| G89728 | NA | other | downstream | 2192272 | 39400524 ~ 39408261 (+) |
