G89539


Basic Information

Item Value
gene id G89539
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 37258543 ~ 37258818 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU111707
cctccttgatctctctgcagcatttgacactgtcgatcactccatcctcctctcctgcctcgctgaccttggaatctctgggactgctctcacctggttctcctcctacctcagtgaccggtcctaccaagtgacatgtcgaggttcctcatccaccccccaacctctcctcacaggcgtaccccaaggctccatcctgggcccgctcctgttctctctctacactcgctccctgggccccctcatcgcatcccatggtttctcctaccacttcta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111707 True 276 lncRNA 0.58 1 37258543 37258818

Neighbor

gene id symbol gene type direction distance location
AMCG00021906 sall3,LOC103388658,LOC102796582,LOC103369140 coding downstream 23702 37212616 ~ 37234841 (-)
AMCG00021905 NA coding downstream 87164 37091198 ~ 37171379 (-)
AMCG00021904 NA coding downstream 258903 36992851 ~ 36999640 (-)
AMCG00021903 atp9b coding downstream 283427 36944033 ~ 36975116 (-)
AMCG00021901 NA coding downstream 384333 36867843 ~ 36874210 (-)
AMCG00021907 galr1,LOC107373077,LOC102797365 coding upstream 698937 37957755 ~ 37958533 (-)
AMCG00021909 NA coding upstream 921262 38180080 ~ 38224604 (-)
AMCG00021908 NA coding upstream 979320 38238138 ~ 38245037 (-)
AMCG00021913 tshz1,LOC107592027,LOC107748691,LOC107696938,LOC107593600 coding upstream 1560593 38819411 ~ 38826295 (-)
AMCG00021921 NA coding upstream 1679789 38938607 ~ 38945501 (-)
G89431 NA non-coding downstream 746612 36511599 ~ 36511931 (-)
G89428 NA non-coding downstream 756715 36498194 ~ 36501828 (-)
G89373 NA non-coding downstream 1273282 35967119 ~ 35985261 (-)
G89359 NA non-coding downstream 1364829 35852036 ~ 35893714 (-)
G89272 LOC101154678 non-coding downstream 1440922 35817366 ~ 35817621 (-)
G89549 NA non-coding upstream 207963 37466781 ~ 37467591 (-)
G89553 NA non-coding upstream 306156 37564974 ~ 37565215 (-)
G89559 NA non-coding upstream 355579 37614397 ~ 37614596 (-)
G89562 NA non-coding upstream 501999 37760817 ~ 37761021 (-)
G89565 NA non-coding upstream 559744 37818562 ~ 37818769 (-)
AMCG00021897 smim13,si:dkey-206d17.5,LOC107559689,LOC107551766 other downstream 570901 36677106 ~ 36687642 (-)
AMCG00021896 tmem170b,LOC107734028,LOC107669975 other downstream 720825 36524509 ~ 36537718 (-)
AMCG00021895 LOC102226217,LOC106946249,LOC103472391,LOC107092461,LOC103135126,LOC106918615,LOC105905342,LOC104924555,LOC108426791,LOC100705487 other downstream 820193 36414879 ~ 36438350 (-)
G89368 NA other downstream 1311559 35943752 ~ 35946984 (-)
G89217 kif13a,LOC101479097,LOC102301062,LOC102786386 other downstream 1862772 35375016 ~ 35395771 (-)
G89598 NA other upstream 1002569 38261387 ~ 38283855 (-)
G89611 NA other upstream 1136753 38395571 ~ 38397755 (-)
AMCG00021918 cndp2,LOC103371436,LOC104951856,LOC105892098,LOC106958632,LOC106588296,LOC102776275 other upstream 1997061 39255879 ~ 39276056 (-)
G89765 NA other upstream 2227015 39485833 ~ 39486288 (-)
AMCG00021924 eppk1,LOC106938278,LOC107592034 other upstream 2228079 39486897 ~ 39548802 (-)

Expression


Co-expression Network