Gene
RNA
| Item | Value |
|---|---|
| gene id | G89552 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030130.1 |
| NCBI id | CM030130.1 |
| chromosome length | 39556810 |
| location | 37564974 ~ 37565215 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU111720 | True | 242 | lncRNA | 0.40 | 1 | 37564974 | 37565215 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00021899 | LOC108426911,LOC108257397,LOC107601986,LOC107707114,LOC107677659,LOC107591967 | coding | upstream | 1063146 | 36465786 ~ 36501828 (+) |
| AMCG00021893 | NA | coding | upstream | 1551319 | 35984055 ~ 36013655 (+) |
| AMCG00021894 | NA | coding | upstream | 1677721 | 35864749 ~ 35887253 (+) |
| AMCG00021886 | NA | coding | upstream | 1971636 | 35579959 ~ 35593338 (+) |
| AMCG00021884 | NA | coding | upstream | 2346843 | 35200245 ~ 35218131 (+) |
| AMCG00021911 | NA | coding | downstream | 555109 | 38120324 ~ 38121572 (+) |
| AMCG00021910 | NA | coding | downstream | 571907 | 38137122 ~ 38142159 (+) |
| AMCG00021912 | NA | coding | downstream | 830591 | 38395806 ~ 38397674 (+) |
| AMCG00021914 | NA | coding | downstream | 1290611 | 38855826 ~ 38865619 (+) |
| AMCG00021915 | NA | coding | downstream | 1793503 | 39358718 ~ 39369622 (+) |
| G89538 | NA | non-coding | upstream | 306139 | 37258561 ~ 37258835 (+) |
| G89527 | NA | non-coding | upstream | 356722 | 37117552 ~ 37208252 (+) |
| G89516 | atp9b,LOC104955405 | non-coding | upstream | 554432 | 37008474 ~ 37010542 (+) |
| G89480 | NA | non-coding | upstream | 709583 | 36848010 ~ 36855391 (+) |
| G89465 | NA | non-coding | upstream | 839583 | 36724112 ~ 36725391 (+) |
| G89554 | NA | non-coding | downstream | 37222 | 37602437 ~ 37602664 (+) |
| G89571 | NA | non-coding | downstream | 452089 | 38017304 ~ 38059534 (+) |
| G89583 | NA | non-coding | downstream | 589620 | 38154835 ~ 38155132 (+) |
| G89579 | NA | non-coding | downstream | 593338 | 38158553 ~ 38161634 (+) |
| G89597 | znf236 | non-coding | downstream | 683699 | 38248914 ~ 38250240 (+) |
| AMCG00021900 | NA | other | upstream | 905730 | 36650232 ~ 36659244 (+) |
| G89299 | NA | other | upstream | 1597590 | 35964571 ~ 35967384 (+) |
| G89142 | NA | other | upstream | 2301437 | 35211133 ~ 35263537 (+) |
| AMCG00021881 | LOC107748698,LOC102792383,LOC101481807,LOC108256925,LOC106919167,LOC108434168 | other | upstream | 2487884 | 34926553 ~ 35077090 (+) |
| AMCG00021802 | kdm1b | other | upstream | 7096054 | 30449957 ~ 30468920 (+) |
| G89578 | NA | other | downstream | 556042 | 38121257 ~ 38151049 (+) |
| G89632 | NA | other | downstream | 1252657 | 38817872 ~ 38822685 (+) |
| G89728 | NA | other | downstream | 1835309 | 39400524 ~ 39408261 (+) |
