G89559


Basic Information

Item Value
gene id G89559
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 37614397 ~ 37614596 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU111727
gtttccactgatcatccttgagatgtttctacaacttgattggagtccacctgtggtaaattcagttgattggacatgatttgtaaaggcacacacctgtctatataagatCCCatagttaacagtgcatgtcagagcacaaaccaagccatgaagtccaaggaattgtctgtagacctccgagacaggattgtatcgag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111727 True 200 lncRNA 0.43 1 37614397 37614596

Neighbor

gene id symbol gene type direction distance location
AMCG00021906 sall3,LOC103388658,LOC102796582,LOC103369140 coding downstream 379556 37212616 ~ 37234841 (-)
AMCG00021905 NA coding downstream 443018 37091198 ~ 37171379 (-)
AMCG00021904 NA coding downstream 614757 36992851 ~ 36999640 (-)
AMCG00021903 atp9b coding downstream 639281 36944033 ~ 36975116 (-)
AMCG00021901 NA coding downstream 740187 36867843 ~ 36874210 (-)
AMCG00021907 galr1,LOC107373077,LOC102797365 coding upstream 343159 37957755 ~ 37958533 (-)
AMCG00021909 NA coding upstream 565484 38180080 ~ 38224604 (-)
AMCG00021908 NA coding upstream 623542 38238138 ~ 38245037 (-)
AMCG00021913 tshz1,LOC107592027,LOC107748691,LOC107696938,LOC107593600 coding upstream 1204815 38819411 ~ 38826295 (-)
AMCG00021921 NA coding upstream 1324011 38938607 ~ 38945501 (-)
G89553 NA non-coding downstream 49182 37564974 ~ 37565215 (-)
G89549 NA non-coding downstream 146806 37466781 ~ 37467591 (-)
G89539 NA non-coding downstream 355579 37258543 ~ 37258818 (-)
G89431 NA non-coding downstream 1102466 36511599 ~ 36511931 (-)
G89428 NA non-coding downstream 1112569 36498194 ~ 36501828 (-)
G89562 NA non-coding upstream 146221 37760817 ~ 37761021 (-)
G89565 NA non-coding upstream 203966 37818562 ~ 37818769 (-)
G89566 NA non-coding upstream 278198 37892794 ~ 37893012 (-)
G89567 NA non-coding upstream 327751 37942347 ~ 37942680 (-)
G89570 NA non-coding upstream 365493 37980089 ~ 37980414 (-)
AMCG00021897 smim13,si:dkey-206d17.5,LOC107559689,LOC107551766 other downstream 926755 36677106 ~ 36687642 (-)
AMCG00021896 tmem170b,LOC107734028,LOC107669975 other downstream 1076679 36524509 ~ 36537718 (-)
AMCG00021895 LOC102226217,LOC106946249,LOC103472391,LOC107092461,LOC103135126,LOC106918615,LOC105905342,LOC104924555,LOC108426791,LOC100705487 other downstream 1176047 36414879 ~ 36438350 (-)
G89368 NA other downstream 1667413 35943752 ~ 35946984 (-)
G89217 kif13a,LOC101479097,LOC102301062,LOC102786386 other downstream 2218626 35375016 ~ 35395771 (-)
G89598 NA other upstream 646791 38261387 ~ 38283855 (-)
G89611 NA other upstream 780975 38395571 ~ 38397755 (-)
AMCG00021918 cndp2,LOC103371436,LOC104951856,LOC105892098,LOC106958632,LOC106588296,LOC102776275 other upstream 1641283 39255879 ~ 39276056 (-)
G89765 NA other upstream 1871237 39485833 ~ 39486288 (-)
AMCG00021924 eppk1,LOC106938278,LOC107592034 other upstream 1872301 39486897 ~ 39548802 (-)

Expression


Co-expression Network