G89570


Basic Information

Item Value
gene id G89570
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 37980089 ~ 37980414 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU111738
tggtttctggttccggttcgggctacagagctacaggttgagctgtggcagcaagttactggttcaggtgagagagagagagagagagagagagagagactgtgcgctgttccttatagtctgtcagatcaataggtgattggttcttgagttcttgagattggatttcggtttcagcccccagtgtcctattggaggggggcttgatttatgactgatgtcaatccatgccatcttttggaaatgccggttggcccgggttcgtagctctatgtcgggatttcggctctcgtccacttcaaagagttttatcacctacaggcccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111738 True 326 lncRNA 0.50 1 37980089 37980414

Neighbor

gene id symbol gene type direction distance location
AMCG00021907 galr1,LOC107373077,LOC102797365 coding downstream 21556 37957755 ~ 37958533 (-)
AMCG00021906 sall3,LOC103388658,LOC102796582,LOC103369140 coding downstream 745248 37212616 ~ 37234841 (-)
AMCG00021905 NA coding downstream 808710 37091198 ~ 37171379 (-)
AMCG00021904 NA coding downstream 980449 36992851 ~ 36999640 (-)
AMCG00021903 atp9b coding downstream 1004973 36944033 ~ 36975116 (-)
AMCG00021909 NA coding upstream 199666 38180080 ~ 38224604 (-)
AMCG00021908 NA coding upstream 257724 38238138 ~ 38245037 (-)
AMCG00021913 tshz1,LOC107592027,LOC107748691,LOC107696938,LOC107593600 coding upstream 838997 38819411 ~ 38826295 (-)
AMCG00021921 NA coding upstream 958193 38938607 ~ 38945501 (-)
AMCG00021920 znf407,LOC106583495,LOC106605077 coding upstream 1064371 39044785 ~ 39052673 (-)
G89567 NA non-coding downstream 37409 37942347 ~ 37942680 (-)
G89566 NA non-coding downstream 87077 37892794 ~ 37893012 (-)
G89565 NA non-coding downstream 161320 37818562 ~ 37818769 (-)
G89562 NA non-coding downstream 219068 37760817 ~ 37761021 (-)
G89559 NA non-coding downstream 365493 37614397 ~ 37614596 (-)
G89584 NA non-coding upstream 154846 38135260 ~ 38151050 (-)
G89587 NA non-coding upstream 172814 38153228 ~ 38153513 (-)
G89588 NA non-coding upstream 174346 38154760 ~ 38155121 (-)
G89609 NA non-coding upstream 368809 38349223 ~ 38349555 (-)
G89612 NA non-coding upstream 431633 38412047 ~ 38414262 (-)
AMCG00021897 smim13,si:dkey-206d17.5,LOC107559689,LOC107551766 other downstream 1292447 36677106 ~ 36687642 (-)
AMCG00021896 tmem170b,LOC107734028,LOC107669975 other downstream 1442371 36524509 ~ 36537718 (-)
AMCG00021895 LOC102226217,LOC106946249,LOC103472391,LOC107092461,LOC103135126,LOC106918615,LOC105905342,LOC104924555,LOC108426791,LOC100705487 other downstream 1541739 36414879 ~ 36438350 (-)
G89368 NA other downstream 2033105 35943752 ~ 35946984 (-)
G89217 kif13a,LOC101479097,LOC102301062,LOC102786386 other downstream 2584318 35375016 ~ 35395771 (-)
G89598 NA other upstream 280973 38261387 ~ 38283855 (-)
G89611 NA other upstream 415157 38395571 ~ 38397755 (-)
AMCG00021918 cndp2,LOC103371436,LOC104951856,LOC105892098,LOC106958632,LOC106588296,LOC102776275 other upstream 1275465 39255879 ~ 39276056 (-)
G89765 NA other upstream 1505419 39485833 ~ 39486288 (-)
AMCG00021924 eppk1,LOC106938278,LOC107592034 other upstream 1506483 39486897 ~ 39548802 (-)

Expression


Co-expression Network